1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
CAAAGACCCAGTGGTGATGGGGTTCCAAGATATATGGACACTTTGCATGTTGTGAAAGAAACTGCACGgtacatattaaaacccatcctagatttagtttacatctttatattggcaaataagcaaaggtgaaactggacagaaatcataaatattaatggtgattag...
species | Glycine max |
transcript | GLYMA02G05890.2 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: GGGGTTCCAAGATATATGGACACTTTGCATGTTGTGAAAGAAACTGCACG ATTTTGTTCTGTTGCAGATTTGAAAGTGTCCGAGGTTTTTACAAAGGAATTEST: gi|14516453|gb|BI095125.1|BI095125
genomic: GGGGTTCCAAGATATATGGACACTTTGCATGTTGTGAAAGAAACTGCACGgtacatatta ... gccattatagATTTTGTTCTGTTGCAGATTTGAAAGTGTCCGAGGTTTTTACAAAGGAATT
EST: CAAGATATATGGACACTTTGCATGTTGTGAAAGAAACTGCACG ATTTTGTTCTGTTGCAGATTTGAAAGTGTCCGAGGTTTTTACAAAGGAATTEST: gi|14516454|gb|BI095126.1|BI095126
genomic: CAAGATATATGGACACTTTGCATGTTGTGAAAGAAACTGCACGgtacatatta ... gccattatagATTTTGTTCTGTTGCAGATTTGAAAGTGTCCGAGGTTTTTACAAAGGAATT
EST: GGGGTTCCAAGATATATGGACACTTTGCATGTTGTGAAAGAAACTGCACG ATTTTGTTCTGTTGCAGATTTGAAAGTGTCCGAGGTTTTTACAAAGGAATT
genomic: GGGGTTCCAAGATATATGGACACTTTGCATGTTGTGAAAGAAACTGCACGgtacatatta ... gccattatagATTTTGTTCTGTTGCAGATTTGAAAGTGTCCGAGGTTTTTACAAAGGAATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAAAGACCCAGTGGTGATGGGGTTCCAAGATATATGGACACTTTGCATGTTGTGAAAGAAACTGCACGgtacatattaaaacccatcctagatttagtttacatctttatattggcaaataagcaaaggtgaaactggacagaaatcataaatattaatggtgattag
- - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA