1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GTTGTTAACAGGATCAATCCTAGCTCATGAGATGATGCATGCATGGCTTAGGCTTAAAGgtattcagccattaacatgatgcagaaagtttatatttttgtttcatggtgccaagttggacaaaatttctggattttatacag
species | Glycine max |
transcript | GLYMA01G38640.1 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: AGGATCAATCCTAGCTCATGAGATGATGCATGCATGGCTTAGGCTTAAAG GTTATCCTAACCTCAGTCCAGAAGTTGAAGAAGGAATCTGCCAAGTCTTGGEST: gi|16342226|gb|BI967821.1|BI967821
genomic: AGGATCAATCCTAGCTCATGAGATGATGCATGCATGGCTTAGGCTTAAAGgtattcagcc ... ttttatacagGTTATCCTAACCTCAGTCCAGAAGTTGAAGAAGGAATCTGCCAAGTCTTGG
EST: AGGATCAATCCTAGCTCATGAGATGATGCATGCATGGCTTAGGCTTAAAG GTTATCCTAACCTCAGTCCAGAAGTTGAAGAAGGAATCTGCCAAGTCTTGGEST: gi|6566329|gb|AW234002.1|AW234002
genomic: AGGATCAATCCTAGCTCATGAGATGATGCATGCATGGCTTAGGCTTAAAGgtattcagcc ... ttttatacagGTTATCCTAACCTCAGTCCAGAAGTTGAAGAAGGAATCTGCCAAGTCTTGG
EST: AGGATCAATCCTAGCTCATGAGATGATGCATGCATGGCTTAGGCTTAAAG GTTATCCTAACCTCAGTCCAGAAGTTGAAGAAGGAATCTGCCAAGTCTTGG
genomic: AGGATCAATCCTAGCTCATGAGATGATGCATGCATGGCTTAGGCTTAAAGgtattcagcc ... ttttatacagGTTATCCTAACCTCAGTCCAGAAGTTGAAGAAGGAATCTGCCAAGTCTTGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTGTTAACAGGATCAATCCTAGCTCATGAGATGATGCATGCATGGCTTAGGCTTAAAGgtattcagccattaacatgatgcagaaagtttatatttttgtttcatggtgccaagttggacaaaatttctggattttatacag
- - - - - - - - - - AGCTCA
- - - - - - - - - - - - - - GAGATG