1 5' 3' | 2 5' 3' | 3 5' 3' |
CCGATCGAATTGAGATTTCAATTTGTCAACAGAAAAACCTAATGTCTCATCGAGACTCTGATTCCAAGCGTCGCCACTCCAAGTTCGATCGAGAACCAAGgtgctctctactctcccaatgcttctattcttatccctattcgcatgcttttcaatttaacctaacacgtaacggagtgcattgagttagggttattcac...
species | Glycine max |
transcript | GLYMA20G27030.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CGAGACTCTGATTCCAAGCGTCGCCACTCCAAGTTCGATCGAGAACCAAG TCCCAAGAGATATAGAAGGGATGGTAAACAAGAAAGAGAAAGGGACAGGAAEST: gi|18734241|gb|BM528070.1|BM528070
genomic: CGAGACTCTGATTCCAAGCGTCGCCACTCCAAGTTCGATCGAGAACCAAGgtgctctcta ... ggggttgcagTCCCAAGAGATATAGAAGGGATGGTAAACAAGAAAGAGAAAGGGACAGGAA
EST: CGAGACTCTGATTCCAAGCGTCGCCACTCCAAGTTCGATCGAGAACCAAG TCCCAAGAGATATAGAAGGGATGGTAAACAAGAAAGAGAAAGGGACAGGAAEST: gi|193618554|gb|FK566686.1|FK566686
genomic: CGAGACTCTGATTCCAAGCGTCGCCACTCCAAGTTCGATCGAGAACCAAGgtgctctcta ... ggggttgcagTCCCAAGAGATATAGAAGGGATGGTAAACAAGAAAGAGAAAGGGACAGGAA
EST: CGAGACTCTGATTCCAAGCGTCGCCACTCCAAGTTCGATCGAGAACCAAG TCCCAAGAGATATAGAAGGGATGGTAAACAAGAAAGAGAAAGGGACAGGAAEST: gi|193397411|gb|FK361093.1|FK361093
genomic: CGAGACTCTGATTCCAAGCGTCGCCACTCCAAGTTCGATCGAGAACCAAGgtgctctcta ... ggggttgcagTCCCAAGAGATATAGAAGGGATGGTAAACAAGAAAGAGAAAGGGACAGGAA
EST: CGAGACTCTGATTCCAAGCGTCGCCACTCCAAGTTCGATCGAGAACCAAG TCCCAAGAGATATAGAAGGGATGGTAAACAAGAAAAGAGAAAGGGACAGGAEST: gi|298197509|gb|HO044988.1|HO044988
genomic: CGAGACTCTGATTCCAAGCGTCGCCACTCCAAGTTCGATCGAGAACCAAGgtgctctcta ... ggggttgcagTCCCAAGAGATATAGAAGGGATGGTAAACAAGAAA-GAGAAAGGGACAGGA
EST: CGAGACCCCGATTCCAAGCGTCGCCACTCCAAGTTCGATCGAGAACCAAG TCCCAAGAGATATAGAAGGGATGGTAAACACGAAAGAGAAAGGGACAGGAAEST: gi|298189778|gb|HO038181.1|HO038181
genomic: CGAGACTCTGATTCCAAGCGTCGCCACTCCAAGTTCGATCGAGAACCAAGgtgctctcta ... ggggttgcagTCCCAAGAGATATAGAAGGGATGGTAAACAAGAAAGAGAAAGGGACAGGAA
EST: CGAGACTCTGATTCCAAGCGTCGCCACTCCAAGTTCGATCGAGAACCAAG TCCCAAGAGATATAGAAGGGATGGTAAACAAGAAAGAGAAAGGGACAGGAA
genomic: CGAGACTCTGATTCCAAGCGTCGCCACTCCAAGTTCGATCGAGAACCAAGgtgctctcta ... ggggttgcagTCCCAAGAGATATAGAAGGGATGGTAAACAAGAAAGAGAAAGGGACAGGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCGATCGAATTGAGATTTCAATTTGTCAACAGAAAAACCTAATGTCTCATCGAGACTCTGATTCCAAGCGTCGCCACTCCAAGTTCGATCGAGAACCAAGgtgctctctactctcccaatgcttctattcttatccctattcgcatgcttttcaatttaacctaacacgtaacggagtgcattgagttagggttattcac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctctccc