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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGTGAGGATGAACAAGAGGAAGGCGCTTCCAGATCTTTGCAATCGAGAAGTCGGCCACCTATCCCCCAGAAATTTCGCTCTCCGTCTTGGCTCTTCCGAGgtccccacacttgtcctaactctctttctttttccttctcgtcaaggctattatttcatttttgttttcgccatctcatcaattttag

Basic information

species Glycine max
transcript GLYMA20G23960.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298172696|gb|HO019736.1|HO019736
EST:     TCGGCCACCTATCCCCCAGAAATTTCGCTCTCCGTCTTGGCTCTTCCGAG                         GATCTTGTCCTTCGACTTCAATTACTGAGGAATCTGCAAAAGCACCGAGGT
genomic: TCGGCCACCTATCCCCCAGAAATTTCGCTCTCCGTCTTGGCTCTTCCGAGgtccccacac ... tcaattttagGATCTTGTCCTTCGACTTCAATTACTGAGGAATCTGCAAAAGCACCGAGGT
EST: gi|192306557|gb|FG996233.1|FG996233
EST:     TCGGCCACCTATCCCCCAGAAATTTCGCTCTCCGTCTTGACTCTTCCGAG                         GATCTTGTCCTTCGACTTCAATTACTGAGGAATCTGCAAAAGCACCGAGGT
genomic: TCGGCCACCTATCCCCCAGAAATTTCGCTCTCCGTCTTGGCTCTTCCGAGgtccccacac ... tcaattttagGATCTTGTCCTTCGACTTCAATTACTGAGGAATCTGCAAAAGCACCGAGGT