1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
TGTCTCTCTCTCTCTGTGTGGGAAGAACGAAGAAGAAGAAGCATCACAGAACCGAACCCATTCAGAAGCAAATCCGAAAACCCCTCACTTAATATTACTGgtacgctatgcaaaatcactcctttttgttttccatcaataaatatgcctctttttcttcgccccacttcttgtttcgatccaattctaaccattcccat...
species | Glycine max |
transcript | GLYMA19G44860.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ACCGAACCCATTCAGAAGCAAATCCGAAAACCCCTCACTTAATATTACTG GTATTCAGCTGTTCATGACAAAAGCCTGAACCAATCATGTCAGAAGGTGCAEST: gi|298167491|gb|HO012754.1|HO012754
genomic: ACCGAACCCATTCAGAAGCAAATCCGAAAACCCCTCACTTAATATTACTGgtacgctatg ... aaccctgcagGTATTCAGCTGTTCATGACAAAAGCCTGAACCAATCATGTCAGAAGGTGCA
EST: ACCGAACCCATTCAGAAGCAAATCCGAAAACCCCTCACTTAATATTACTG GTATTCAGCTGTTCATGACAAAAGCCTGAACCAATCATGTCAGAAGGTGCAEST: gi|213604800|gb|DB960523.1|DB960523
genomic: ACCGAACCCATTCAGAAGCAAATCCGAAAACCCCTCACTTAATATTACTGgtacgctatg ... aaccctgcagGTATTCAGCTGTTCATGACAAAAGCCTGAACCAATCATGTCAGAAGGTGCA
EST: ACCGAACCCATTCAGAAGCAAATCCGAAAACCCCTCACTTAATATTACTG GTATTCAGCTGTTCATGACAAAAGCCTGAACCAATCATGTCAGAAGGTGCAEST: gi|213604621|gb|DB966708.1|DB966708
genomic: ACCGAACCCATTCAGAAGCAAATCCGAAAACCCCTCACTTAATATTACTGgtacgctatg ... aaccctgcagGTATTCAGCTGTTCATGACAAAAGCCTGAACCAATCATGTCAGAAGGTGCA
EST: ACCGAACCCATTCAGAAGCAAATCCGAAAACCCCTCACTTAATATTACTG GTATTCAGCTGTTCATGACAAAAGCCTGAACCAATCATGTCAGAAGGTGCAEST: gi|209703598|gb|BW683381.1|BW683381
genomic: ACCGAACCCATTCAGAAGCAAATCCGAAAACCCCTCACTTAATATTACTGgtacgctatg ... aaccctgcagGTATTCAGCTGTTCATGACAAAAGCCTGAACCAATCATGTCAGAAGGTGCA
EST: ACCGAACCCATTCAGAAGCAAATCCGAAAACCCCTCACTTAATATTACTG GTATTCAGCTGTTCATGACAAAAGCCTGAACCAATCATGTCAGAAGGTGCA
genomic: ACCGAACCCATTCAGAAGCAAATCCGAAAACCCCTCACTTAATATTACTGgtacgctatg ... aaccctgcagGTATTCAGCTGTTCATGACAAAAGCCTGAACCAATCATGTCAGAAGGTGCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGTCTCTCTCTCTCTGTGTGGGAAGAACGAAGAAGAAGAAGCATCACAGAACCGAACCCATTCAGAAGCAAATCCGAAAACCCCTCACTTAATATTACTGgtacgctatgcaaaatcactcctttttgttttccatcaataaatatgcctctttttcttcgccccacttcttgtttcgatccaattctaaccattcccat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gccccac