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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGATGTTAGTTGAGTGGTTGGGCGGATTCAGGTATATATATATGGCTCTCCTTCCAAAACCCTAGATTCGTAACTGTACCTTTTCCTCGTCCCATTCAAGgtaattttacactctacactaacttgttcaataattgattattcgtttgtcatggccattagtgtcttccacctctagatccagttaattcgaatccttcctcctgctacttgcatgtgatgtttcgtttctgtcaatatctataatagtatcatttactgtgtatcttggcag

Basic information

species Glycine max
transcript GLYMA19G43540.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209717840|gb|BW668977.1|BW668977
EST:     GTACCTTTTCCTCGTCCCATTCAAG                         TGAAACCTTGATGGCTGAAGTGGATCAGTACACGGGCGGTGAGCATGAGGT
genomic: GTACCTTTTCCTCGTCCCATTCAAGgtaattttac ... atcttggcagTGAAACCTTGATGGCTGAAGTGGATCAGTACACGGGCGGTGAGCATGAGGT
EST: gi|209699674|gb|BW655740.1|BW655740
EST:     CTTCCAAAACCCTAGATTCGTAACTGTACCTTTTCCTCGTCCCATTCAAG                         TGAAACCTTGATGGCTGAAGTGGATCAGTACACGGGCGGTGAGCATGAGGT
genomic: CTTCCAAAACCCTAGATTCGTAACTGTACCTTTTCCTCGTCCCATTCAAGgtaattttac ... atcttggcagTGAAACCTTGATGGCTGAAGTGGATCAGTACACGGGCGGTGAGCATGAGGT