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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAGAAATTAGAAAGGGCGAAAGGCGCACTTTATCTGAAAGCAAAAACCCTACCTAGGGTCAACCGTGACGCCACAATCGCCTTCGGCATCTTTGCAACGGgtagcacataccttgcatttgaaaccctagcctagatggttctctgcttcagttcctaatcggtaataattctcttttggctattgcag

Basic information

species Glycine max
transcript GLYMA19G40930.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209707571|gb|BW680941.1|BW680941
EST:     ACCTAGGGTCAACCGTGACGCCACAATCGCCTTCGGCATCTTTGCAACGG                         GATCAGGTGCTCCTCGTCCTTCACGATGGCGGGAACTGAAGCCNNNNNNNC
genomic: ACCTAGGGTCAACCGTGACGCCACAATCGCCTTCGGCATCTTTGCAACGGgtagcacata ... gctattgcagGATCAGGTGCTCCTCGTCCTTCACGATGGCGGGAACTGAAGCCAAAAAAAC
EST: gi|208254248|gb|GE052054.1|GE052054
EST:     ACCTAGGGTCAACCGTGACGCCACAATCGCCTTCGGCATCTTTGCAACGG                         GATCAGGTGCTCCTCGTCCTTCACGATGGCGGGAACGTGAAG
genomic: ACCTAGGGTCAACCGTGACGCCACAATCGCCTTCGGCATCTTTGCAACGGgtagcacata ... gctattgcagGATCAGGTGCTCCTCGTCCTTCACGATGGCGGGAAC-TGAAG
EST: gi|209700498|gb|BW664460.1|BW664460
EST:     ACCTAGGGTCAACCGTGACGCCACAATCGCCTTCGGCATCTTTGCAACGG                         GATCAGGTGCTCCTCGTCCTTCACGATGGCGGGAACTGAAGCCNNNNNNNC
genomic: ACCTAGGGTCAACCGTGACGCCACAATCGCCTTCGGCATCTTTGCAACGGgtagcacata ... gctattgcagGATCAGGTGCTCCTCGTCCTTCACGATGGCGGGAACTGAAGCCAAAAAAAC
EST: gi|213604934|gb|DB956323.1|DB956323
EST:     ACCTAGGGTCAACCGTGACGCCACAATCGCCTTCGGCATCTTTGCAACGG                         GATCAGGTGCTCCTCGTCCTTCACGATGGCGGGAACTGAAGCCNNNNNNNC
genomic: ACCTAGGGTCAACCGTGACGCCACAATCGCCTTCGGCATCTTTGCAACGGgtagcacata ... gctattgcagGATCAGGTGCTCCTCGTCCTTCACGATGGCGGGAACTGAAGCCAAAAAAAC