1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
ATTACTTTCTGCGAGTCCTCGTTGTAGAATTTGTCATGAAGAAGAGTTTGAAAGCGTAGAAACCTTGGAAGCACCTTGTGCTTGTTCTGGGACCGTTAAGgtaagtaaacacagaatacataagacgcaatttcttaatcttaagcacttgttattttgttattaagctattattatgcttccttgatttttttttaattctcatcaataactgcgtttttgttgcgcag
species | Glycine max |
transcript | GLYMA19G40340.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AAAGCGTAGAAACCTTGGAAGCACCTTGTGCTTGTTCTGGGACCGTTAAG TTTGCTCATAGAGATCGCATACAGAGATGGTGCAACGAAAAAGGAAATACAEST: gi|213614284|gb|DB964944.1|DB964944
genomic: AAAGCGTAGAAACCTTGGAAGCACCTTGTGCTTGTTCTGGGACCGTTAAGgtaagtaaac ... tgttgcgcagTTTGCTCATAGAGATTGCATACAGAGATGGTGCAACGAAAAAGGAAATACA
EST: AAAGCGTAGAAACCTTGGAAGCACCTTGTGCTTGTTCTGGGACCGTTAAG TTTGCTCATAGAGATTGCATACAGAGATGGTGCAACGAAAAAGGAAATACAEST: gi|151407045|gb|EV276860.1|EV276860
genomic: AAAGCGTAGAAACCTTGGAAGCACCTTGTGCTTGTTCTGGGACCGTTAAGgtaagtaaac ... tgttgcgcagTTTGCTCATAGAGATTGCATACAGAGATGGTGCAACGAAAAAGGAAATACA
EST: AAAGCGTAGAAACCTTGGAAGCACCTTGTGCTTGTTCTGGGACCGTTAAG TTTGCTCATAGAGATTGCATACAGAGATGGTGCAACGAAAAAGGAAATACA
genomic: AAAGCGTAGAAACCTTGGAAGCACCTTGTGCTTGTTCTGGGACCGTTAAGgtaagtaaac ... tgttgcgcagTTTGCTCATAGAGATTGCATACAGAGATGGTGCAACGAAAAAGGAAATACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTACTTTCTGCGAGTCCTCGTTGTAGAATTTGTCATGAAGAAGAGTTTGAAAGCGTAGAAACCTTGGAAGCACCTTGTGCTTGTTCTGGGACCGTTAAGgtaagtaaacacagaatacataagacgcaatttcttaatcttaagcacttgttattttgttattaagctattattatgcttccttgatttttttttaattctcatcaataactgcgtttttgttgcgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG