1 5' 3' | 2 5' 3' |
AACAGAGGACTCCTCGCGGATAAGCTGGTTTATGGGAACCATCTCTTCTGTTAACTTTGCTGATCCAAGATGGCCCAACTCTCCTTGGAGACTTCTCCAGgtactgtttaaccgtgtttgttgaatttaatatcttccttccagagttgaacatactttattacatggtattgataaatggagaactgtgcttttaatct...
species | Glycine max |
transcript | GLYMA19G36570.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TTAACTTTGCTGATCCAAGATGGCCCAACTCTCCTTGGAGACTTCTCCAG GTTACATGGGATGAACCAGAGTTACTTCAAAATGTAAAAAGGGTGAGCCCGEST: gi|14259948|gb|BG882856.1|BG882856
genomic: TTAACTTTGCTGATCCAAGATGGCCCAACTCTCCTTGGAGACTTCTCCAGgtactgttta ... gaacttttagGTTACATGGGATGAACCAGAGTTACTTCAAAATGTAAAAAGGGTGAGCCCG
EST: TTAACTTTGCTGATCCAAGATGGCCCAACTCTCCTTGGAGACTTCTCCAG GTTACATGGGATGAACCAGAGTTACTTCAAAATGTAAAAAGGGTGAGCCCG
genomic: TTAACTTTGCTGATCCAAGATGGCCCAACTCTCCTTGGAGACTTCTCCAGgtactgttta ... gaacttttagGTTACATGGGATGAACCAGAGTTACTTCAAAATGTAAAAAGGGTGAGCCCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AACAGAGGACTCCTCGCGGATAAGCTGGTTTATGGGAACCATCTCTTCTGTTAACTTTGCTGATCCAAGATGGCCCAACTCTCCTTGGAGACTTCTCCAGgtactgtttaaccgtgtttgttgaatttaatatcttccttccagagttgaacatactttattacatggtattgataaatggagaactgtgcttttaatct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ttccttcc