1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GTAACAGGGATGGCTGGTCCTAGTGGGTTTGGATCAGCTTCCACTGCAGAACAGGTTACTGATGGAATTGATGCCAGCAACCTCACTGCAATTATCACAGgtcagttttaatttacaatttcaatatccctctacatatatatgcatcagtttcgtaccacaagtgtaacaaaatcttcgtattcatgatattccttaca...
species | Glycine max |
transcript | GLYMA19G35630.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ACAGGTTACTGATGGAATTGATGCCAGCAACCTCACTGCAATTATCACAG GAGGAGCAAGTGGTATACGCTTGGAGACAGCAAGAGTGTTGGCTCTTCGAAEST: gi|207821113|gb|GD792208.1|GD792208
genomic: ACAGGTTACTGATGGAATTGATGCCAGCAACCTCACTGCAATTATCACAGgtcagtttta ... aaaaacgcagGAGGAGCAAGTGGTATAGGCTTGGAGACAGCAAGAGTGTTGGCTCTTCGAA
EST: ACAGGTTACTGATGGAATTGATGCCAGCAACCTCACTGCAATTATCACAG GAGGAGCAAGTGGTATAGGCTTGGAGACAGCAAGAGTGTTEST: gi|14259045|gb|BG881953.1|BG881953
genomic: ACAGGTTACTGATGGAATTGATGCCAGCAACCTCACTGCAATTATCACAGgtcagtttta ... aaaaacgcagGAGGAGCAAGTGGTATAGGCTTGGAGACAGCAAGAGTGTT
EST: ACAGGTTACTGATGGAATTGATGCCAGCAACCTCACTGCAATTATCACAG GAGGAGCAAGTGGTATAGGCTTGGAGACAGCAAGAGTGTTGGCTCTTCGAAEST: gi|207782875|gb|GD751520.1|GD751520
genomic: ACAGGTTACTGATGGAATTGATGCCAGCAACCTCACTGCAATTATCACAGgtcagtttta ... aaaaacgcagGAGGAGCAAGTGGTATAGGCTTGGAGACAGCAAGAGTGTTGGCTCTTCGAA
EST: ACAGGTTACTGATGGAATTGATGCCAGCAACCTCACTGCAATTATCACAG GAGGAGCAAGTGGTATAGGCTTGGAGACAGCAAGAG
genomic: ACAGGTTACTGATGGAATTGATGCCAGCAACCTCACTGCAATTATCACAGgtcagtttta ... aaaaacgcagGAGGAGCAAGTGGTATAGGCTTGGAGACAGCAAGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTAACAGGGATGGCTGGTCCTAGTGGGTTTGGATCAGCTTCCACTGCAGAACAGGTTACTGATGGAATTGATGCCAGCAACCTCACTGCAATTATCACAGgtcagttttaatttacaatttcaatatccctctacatatatatgcatcagtttcgtaccacaagtgtaacaaaatcttcgtattcatgatattccttaca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccctctac