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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CAAAACCAAAAATGGATGATTCTGGAAGTAAAACTAAACTGTTGAATCCATGGATGCTCCACTTCCAGAAACTCGCTCTCGAACTCAAGTGCCCTCTCTGgttcgtcaatttccactcactctctctaatttaaactctatttcgcttttatagcctttgcagttgcaattttttttttttaattttctttaaataaatttcctgcttgtgcctgatcctgcag

Basic information

species Glycine max
transcript GLYMA19G35010.3
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|5058291|gb|AI736767.1|AI736767
EST:     TGGATGCTCCACTTCCAGAAACTCGCTCTCGAACTCAAGTGCCCTCTCTG                         TTTGAGTTTGTTCAAGAGGCCGGTGTTACTTCCATGCAACCACTTGTTCTG
genomic: TGGATGCTCCACTTCCAGAAACTCGCTCTCGAACTCAAGTGCCCTCTCTGgttcgtcaat ... gatcctgcagTTTGAGTTTGTTCAAGAGGCCGGTGTTACTTCCATGCAACCACTTGTTCTG
EST: gi|193369053|gb|FK338471.1|FK338471
EST:     TGGATGCTCCACTTCCAGAAACTCGCTCTCGAACTCAAGTGCCCTCTCTG                         TTTGAGTTTGTTCAAGAGGCCGGTGTTACTTCCATGCAACCACTTGTTCTG
genomic: TGGATGCTCCACTTCCAGAAACTCGCTCTCGAACTCAAGTGCCCTCTCTGgttcgtcaat ... gatcctgcagTTTGAGTTTGTTCAAGAGGCCGGTGTTACTTCCATGCAACCACTTGTTCTG
EST: gi|213617091|gb|DB961571.1|DB961571
EST:     TGGATGCTCCACTTCCAGAAACTCGCTCTCGAACTCAAGTGCCCTCTCTG                         TTTGAGTTTGTTCAAGAGGCCGGTGTTACTTCCATGCAACCACTTGTTCTG
genomic: TGGATGCTCCACTTCCAGAAACTCGCTCTCGAACTCAAGTGCCCTCTCTGgttcgtcaat ... gatcctgcagTTTGAGTTTGTTCAAGAGGCCGGTGTTACTTCCATGCAACCACTTGTTCTG
EST: gi|209704697|gb|BW656675.1|BW656675
EST:     TGGATGCTCCACTTCCAGAAACTCGCTCTCGAACTCAAGTGCCCTCTCTG                         TTTGAGTTTGTTCAAGAGGCCGGTGTTACTTCCATGCAACCACTTGTTCTG
genomic: TGGATGCTCCACTTCCAGAAACTCGCTCTCGAACTCAAGTGCCCTCTCTGgttcgtcaat ... gatcctgcagTTTGAGTTTGTTCAAGAGGCCGGTGTTACTTCCATGCAACCACTTGTTCTG
EST: gi|192295523|gb|FG988097.1|FG988097
EST:     TGGATGCTCCACTTCCAGAAACTCGCTCTCGAACTCAAGTGCCCTCTCTG                         TTTGAGTTTGTTCAAGAGGCCGGTGTTACTTCCATGCAACCACTTGTTCTG
genomic: TGGATGCTCCACTTCCAGAAACTCGCTCTCGAACTCAAGTGCCCTCTCTGgttcgtcaat ... gatcctgcagTTTGAGTTTGTTCAAGAGGCCGGTGTTACTTCCATGCAACCACTTGTTCTG
EST: gi|254319887|gb|GR830911.1|GR830911
EST:     TGGATGCTCCACTTCCAGAAACTCGCTCTCGAACTCAAGTGCCCTCTCTG                         TTTGAGTTTGTTCAAGAGGCCGGTGTTACTTCCATGCAACCACTTGTTCTG
genomic: TGGATGCTCCACTTCCAGAAACTCGCTCTCGAACTCAAGTGCCCTCTCTGgttcgtcaat ... gatcctgcagTTTGAGTTTGTTCAAGAGGCCGGTGTTACTTCCATGCAACCACTTGTTCTG
EST: gi|208211739|gb|GE009958.1|GE009958
EST:     CGCTCTCGAACTCAAGTGCCCTCTCTG                         TTTGAGTTTGTTCAAGAGGCCGGTGTTACTTCCATGCAACCACTTGTTCTG
genomic: CGCTCTCGAACTCAAGTGCCCTCTCTGgttcgtcaat ... gatcctgcagTTTGAGTTTGTTCAAGAGGCCGGTGTTACTTCCATGCAACCACTTGTTCTG
EST: gi|7685076|gb|AW755724.1|AW755724
EST:     TGGATGCTCCACTTCCAGAAACTCGCTCTCGAACTCAAGTGCCCTCTCTG                         TTTGAGTTTGTTCAAGAGGCCGGTGTTACTTCCATGCAACCACTTGTTCTG
genomic: TGGATGCTCCACTTCCAGAAACTCGCTCTCGAACTCAAGTGCCCTCTCTGgttcgtcaat ... gatcctgcagTTTGAGTTTGTTCAAGAGGCCGGTGTTACTTCCATGCAACCACTTGTTCTG