1 5' 3' | 2 5' 3' | 3 5' 3' |
ATACAGGGAAATCATCAATCCAGCGATTTCGAAGCAGAAGAAAGAAGGACAAGAACAAAAAACgttggtattattattattattcaattcttcaatatccatatgcataccaacaagacacgctttttcgttcaatctccatagcggggggtaatttccgtaa...
species | Glycine max |
transcript | GLYMA19G33170.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ATCAATCCAGCGATTTCGAAGCAGAAGAAAGAAGGACAAGAACAAAAAAC ATGTAGCATGCCATAAAAGCAGGAGCTCTGGTTCCTTGTCATCCGGAAAGAEST: gi|192314658|gb|FK005940.1|FK005940
genomic: ATCAATCCAGCGATTTCGAAGCAGAAGAAAGAAGGACAAGAACAAAAAACgttggtatta ... tgtataacagATGTAGCATGCCATAAAAGCAGGAGCTCTGGTTCCTTGTCATCCGGAAAGA
EST: ATCAATCCAGCGATTTCGAAGCAGAAGAAAGAAGGACAAGAACAAAAAAC ATGTAGCATGCCATAAAAGCAGGAGCTCTGGTTCCTTGTCATCCGGAAAGAEST: gi|192317975|gb|FK009455.1|FK009455
genomic: ATCAATCCAGCGATTTCGAAGCAGAAGAAAGAAGGACAAGAACAAAAAACgttggtatta ... tgtataacagATGTAGCATGCCATAAAAGCAGGAGCTCTGGTTCCTTGTCATCCGGAAAGA
EST: ATCAATCCAGCGATTTCGAAGCAGAAGAAAGAAGGACAAGAACAAAAAAC ATGTAGCATGCCATAAAAGCAGGAGCTCTGGTTCCTTGTCATCCGGAAAGAEST: gi|15813020|gb|BI785295.1|BI785295
genomic: ATCAATCCAGCGATTTCGAAGCAGAAGAAAGAAGGACAAGAACAAAAAACgttggtatta ... tgtataacagATGTAGCATGCCATAAAAGCAGGAGCTCTGGTTCCTTGTCATCCGGAAAGA
EST: TCAATCCAGCGATTTCGAAGCAGAAGAAAGAAGGACAAGAACAAAAAAC GEST: gi|15813020|gb|BI785295.1|BI785295
genomic: TCAATCCAGCGATTTCGAAGCAGAAGAAAGAAGGACAAGAACAAAAAACgttggtatta ... tgtataacag-
EST: TCAATCCAGCGATTTCGAAGCAGAAGAAAGAAGGACAAGAACAAAAAAC GEST: gi|15813020|gb|BI785295.1|BI785295
genomic: TCAATCCAGCGATTTCGAAGCAGAAGAAAGAAGGACAAGAACAAAAAACgttggtatta ... tgtataacag-
EST: TCAATCCAGCGATTTCGAAGCAGAAGAAAGAAGGACAAGAACAAAAAAC GEST: gi|15813020|gb|BI785295.1|BI785295
genomic: TCAATCCAGCGATTTCGAAGCAGAAGAAAGAAGGACAAGAACAAAAAACgttggtatta ... tgtataacag-
EST: TCAATCCAGCGATTTCGAAGCAGAAGAAAGAAGGACAAGAACAAAAAAC GEST: gi|15813020|gb|BI785295.1|BI785295
genomic: TCAATCCAGCGATTTCGAAGCAGAAGAAAGAAGGACAAGAACAAAAAACgttggtatta ... tgtataacag-
EST: TCAATCCAGCGATTTCGAAGCAGAAGAAAGAAGGACAAGAACAAAAAAC G
genomic: TCAATCCAGCGATTTCGAAGCAGAAGAAAGAAGGACAAGAACAAAAAACgttggtatta ... tgtataacag-
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATACAGGGAAATCATCAATCCAGCGATTTCGAAGCAGAAGAAAGAAGGACAAGAACAAAAAACgttggtattattattattattcaattcttcaatatccatatgcataccaacaagacacgctttttcgttcaatctccatagcggggggtaatttccgtaa
- - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggggggt