1 5' 3' | 2 5' 3' | 3 5' 3' |
TTTTGCAGCAACAAACAAACATCTTTTACCTTAAACAACAATGGCCGATGCCGAGGATATTCAACCCCTCGTTTGCGATAATGGAACCGGAATGGTCAAGgtatcaatttcccatgggatcataggttttcttttaccgattttgtcgatgactaatcttggcggcaaattaagtctttgtttaagggatctgagtccag...
species | Glycine max |
transcript | GLYMA19G32990.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CCGAGGATATTCAACCCCTCGTTTGCGATAATGGAACCGGAATGGTCAAG GCTGGTTTTGCTGGAGATGATGCACCGAGGGCTGTGTTCCCTAGCATTGTGEST: gi|193663559|gb|FK604585.1|FK604585
genomic: CCGAGGATATTCAACCCCTCGTTTGCGATAATGGAACCGGAATGGTCAAGgtatcaattt ... tgtgatatagGCTGGTTTTGCTGGAGATGATGCACCGAGGGCTGTGTTCCCTAGCATTGTG
EST: CCGAGGATATTCAACCCCTCGTTTGCGATAATGGAACCGGAATGGTCAAG GCTGGTTTTGCTGGAGATGATGCACCGAGGGCTGTGTTCCCTAGCATTGTGEST: gi|41146304|gb|CK606515.1|CK606515
genomic: CCGAGGATATTCAACCCCTCGTTTGCGATAATGGAACCGGAATGGTCAAGgtatcaattt ... tgtgatatagGCTGGTTTTGCTGGAGATGATGCACCGAGGGCTGTGTTCCCTAGCATTGTG
EST: CGAGGATATTCAACCCCTCGTTTGCGATAAT-GAACCGGGAATGGTCAAG GCTGGTTTTGCTGGAGATGATGCACCGAGGGCTGTGTTCCCTAGCATTGTGEST: gi|193421389|gb|FK389590.1|FK389590
genomic: CGAGGATATTCAACCCCTCGTTTGCGATAATGGAACC-GGAATGGTCAAGgtatcaattt ... tgtgatatagGCTGGTTTTGCTGGAGATGATGCACCGAGGGCTGTGTTCCCTAGCATTGTG
EST: CCGAGGATATTCAACCCCTCGTTTGCGATAATGGAACCGGAATGGTCAAG GCTGGTTTTGCTGGAGATGATGCACCGAGGGCTGTGTTCCCTAGCATTGTG
genomic: CCGAGGATATTCAACCCCTCGTTTGCGATAATGGAACCGGAATGGTCAAGgtatcaattt ... tgtgatatagGCTGGTTTTGCTGGAGATGATGCACCGAGGGCTGTGTTCCCTAGCATTGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTTGCAGCAACAAACAAACATCTTTTACCTTAAACAACAATGGCCGATGCCGAGGATATTCAACCCCTCGTTTGCGATAATGGAACCGGAATGGTCAAGgtatcaatttcccatgggatcataggttttcttttaccgattttgtcgatgactaatcttggcggcaaattaagtctttgtttaagggatctgagtccag
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