Skip to another splice site:
1  
 5'  3'   
2  
 5'  3'   
3  
 5'  3'   
4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACACACACAAATTCACACAAACATAAAAAAAAAAAAAAAAAACACACACACACTCTCATACACACGTTGTCGCGCACACATTCCTTCATTCCGCAGgtatcgccacgttctctcttccctctttcatccccccgataagaacaagcacccaccgtttaacgctaatttttgagtgtttttgttttttgcag

Basic information

species Glycine max
transcript GLYMA19G32990.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151396191|gb|EV266068.1|EV266068
EST:     TCTCATACACACGTTGTCGCGCACACATTCCTTCATTCCGCAG                         CAACAAACAAACATCTTTTACCTTAAACAACAATGGCCGATGCCGAGGATA
genomic: TCTCATACACACGTTGTCGCGCACACATTCCTTCATTCCGCAGgtatcgccac ... ttttttgcagCAACAAACAAACATCTTTTACCTTAAACAACAATGGCCGATGCCGAGGATA
EST: gi|192329006|gb|FK019705.1|FK019705
EST:     TCTCATACACACGTTGTCGCGCACACATTCCTTCATTCCGCAG                         CAACAAACAAACATCTTTTACCTTAAACAACAATGGCCGATGCCGAGGATA
genomic: TCTCATACACACGTTGTCGCGCACACATTCCTTCATTCCGCAGgtatcgccac ... ttttttgcagCAACAAACAAACATCTTTTACCTTAAACAACAATGGCCGATGCCGAGGATA
EST: gi|193312823|gb|FK282320.1|FK282320
EST:     TTGTCGCGCACACATTCCTTCATTCCGCAG                         CAACAAACAAACATCTTTTACCTTAAACAACAATGGCCGATGCCGAGGATA
genomic: TTGTCGCGCACACATTCCTTCATTCCGCAGgtatcgccac ... ttttttgcagCAACAAACAAACATCTTTTACCTTAAACAACAATGGCCGATGCCGAGGATA
EST: gi|193421389|gb|FK389590.1|FK389590
EST:     CACATTCCTTCATTCCGCAG                         CAACAAACAAACATCTTTTACCTTAAACAACAATGGCCGATGCCGAGGATA
genomic: CACATTCCTTCATTCCGCAGgtatcgccac ... ttttttgcagCAACAAACAAACATCTTTTACCTTAAACAACAATGGCCGATGCCGAGGATA
EST: gi|193663559|gb|FK604585.1|FK604585
EST:     TTCCTTCATTCCGCAG                         CAACAAACAAACATCTTTTACCTTAAACAACAATGGCCGATGCCGAGGATA
genomic: TTCCTTCATTCCGCAGgtatcgccac ... ttttttgcagCAACAAACAAACATCTTTTACCTTAAACAACAATGGCCGATGCCGAGGATA
EST: gi|193310736|gb|FK274632.1|FK274632
EST:     ACACATTCCTTCATTCCGCAG                         CAACAAACAAACATCTTTTACCTTAAACAACAATGGCCGATTGTCCGAGGA
genomic: ACACATTCCTTCATTCCGCAGgtatcgccac ... ttttttgcagCAACAAACAAACATCTTTTACCTTAAACAACAATGGCCGA-TG-CCGAGGA