Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   		11  
 5'  3'   		12  
 5'  3'   		13  
 5'  3'   		14  
 5'  3'   		15  
 5'  3'   		16  
 5'  3'   		17  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CACACCCCTTTTTAACTACTTACTTCCCACTTTACCCTTCTCAACTCTCTTACTGTTACTATTACTGTTACTCCACCTAAATCAAAATTCAAACATACCTgtgagtttcttttagctctcaaacttgcaaatcagagaccctttatatttaaatgattgccttttttattatgttatggataagaactgtttcatatttc...

Basic information

species Glycine max
transcript GLYMA19G30450.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|5753486|gb|AI960773.1|AI960773
EST:     TACTGTTACTATTACTGTTACTCCACCTAAATCAAAATTCAAACATACCT                         ATTGCATTTGCAGATAGATTGAATGTTGTGAACAAACAATGGGTTCATCCA
genomic: TACTGTTACTATTACTGTTACTCCACCTAAATCAAAATTCAAACATACCTgtgagtttct ... gttgtttcagATTGCATTTGCAGATAGATTGAATGTTGTGAACAAACAATGGGTTCATCCA
EST: gi|209724461|gb|BW662969.1|BW662969
EST:     TACTGTTACTATTACTGTTACTCCACCTAAATCAAAATTCAAACATACCT                         ATTGCATTTGCAGATAGATTGAATGTTGTGAACAAACAATGGGTTCATCCA
genomic: TACTGTTACTATTACTGTTACTCCACCTAAATCAAAATTCAAACATACCTgtgagtttct ... gttgtttcagATTGCATTTGCAGATAGATTGAATGTTGTGAACAAACAATGGGTTCATCCA
EST: gi|254323776|gb|GR836115.1|GR836115
EST:     TACTGTTACTATTACTGTTACTCCACCTAAATCAAAATTCAAACATACCT                         ATTGCATTTGCAGATAGATTGAATGTTGTGAACAAACAATGGGTTCATCCA
genomic: TACTGTTACTATTACTGTTACTCCACCTAAATCAAAATTCAAACATACCTgtgagtttct ... gttgtttcagATTGCATTTGCAGATAGATTGAATGTTGTGAACAAACAATGGGTTCATCCA
EST: gi|254329440|gb|GR839003.1|GR839003
EST:     TACTGTTACTATTACTGTTACTCCACCTAAATCAAAATTCAAACATACCT                         ATTGCATTTGCAGATAGATTGAATGTTGTGAACAAACAATGGGTTCATCCA
genomic: TACTGTTACTATTACTGTTACTCCACCTAAATCAAAATTCAAACATACCTgtgagtttct ... gttgtttcagATTGCATTTGCAGATAGATTGAATGTTGTGAACAAACAATGGGTTCATCCA