Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|24205753|gb|BU965006.1|BU965006EST: TGTGAAGGGTTCTCTACCGATGGCCTTGCTGCTATAGCTGCAAATTGCAG GTTCCTTAGGGAGCTGGATCTGCAAGAAAATGAAGTTGAGGATC
genomic: TGTGAAGGGTTCTCTACCGATGGCCTTGCTGCTATAGCTGCAAATTGCAGgtgagaatga ... tgaaatgtagGTTCCTTAGGGAGCTGGATCTGCAAGAAAATGAAGTTGAGGATC
EST:
gi|5666784|gb|AI930820.1|AI930820EST: TGTGAAGGGTTCTCTACCGATGGCCTTGCTGCTATAGCTGCAAATTGCAG GTTCCTTAGGGAGCTGGATCTGCAAGAAAATGAAGTTGAGGATCACAAAGG
genomic: TGTGAAGGGTTCTCTACCGATGGCCTTGCTGCTATAGCTGCAAATTGCAGgtgagaatga ... tgaaatgtagGTTCCTTAGGGAGCTGGATCTGCAAGAAAATGAAGTTGAGGATCACAAAGG
EST:
gi|18040367|gb|BM308661.1|BM308661EST: TGTGAAGGGTTCTCTACCGATGGCCTTGCTGCTATAGCTGCAAATTGCAG GTTCCTTANGGAGCTGGATCTGCAAGAAAATGAAGTTGAGGATCACAAAGG
genomic: TGTGAAGGGTTCTCTACCGATGGCCTTGCTGCTATAGCTGCAAATTGCAGgtgagaatga ... tgaaatgtagGTTCCTTAGGGAGCTGGATCTGCAAGAAAATGAAGTTGAGGATCACAAAGG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AGCTACTTTCTCGTTCTTTCACACACTTCAAGTCTTTGGTTCTTGTTAGCTGTGAAGGGTTCTCTACCGATGGCCTTGCTGCTATAGCTGCAAATTGCAGgtgagaatgagttgtttgttcggttcaatcttacgttgtttggtttatgggttttgtttgtgcaattttgatggttgtgttttggaggttgtatggttga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC