Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTCGTTTTGCCCACCCCGAAGAAGAAGCGGATTAGTGTCCATGGTTGCTAAGCGCAGCCCCAAGCGTCTCAAGTACACCTCCGCTTCTCGCTTCACCAAGgtttgtttgtttttacgtgccacgtgttcgttacgcaaccgttaactttgatgattgctaatattaacagaaaaagaaaatagtccatgcacttgcaaag...

Basic information

species Glycine max
transcript GLYMA19G25900.3
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|4397101|gb|AI496098.1|AI496098
EST:     AGCGCAGCCCCAAGCGTCTCAAGTACACCTCCGCTTCTCGCTTCACCAAG                         GAGGATGGTTTGGTGTACATTGAAGCAGACCCATCTGCCTCTGATTCTTGG
genomic: AGCGCAGCCCCAAGCGTCTCAAGTACACCTCCGCTTCTCGCTTCACCAAGgtttgtttgt ... taatgaacagGAGGATGGTTTGGTGTACATTGAAGCAGACCCATCTGCCTCTGATTCTTGG
EST: gi|14990559|gb|BI316232.1|BI316232
EST:     GTCTCAAGTACACCTCCGCTTCTCGCTTCACCAAG                         GAGGATGGTTTGGTGTACATTGAAGCAGACCCATCTGCCTCTGATTCTTGG
genomic: GTCTCAAGTACACCTCCGCTTCTCGCTTCACCAAGgtttgtttgt ... taatgaacagGAGGATGGTTTGGTGTACATTGAAGCAGACCCATCTGCCTCTGATTCTTGG
EST: gi|13181562|gb|BG352902.1|BG352902
EST:     AGCGCAGCCCCAAGCGTCTCAAGTACACCTCCGCTTCTCGCTTCACCAAG                         GAGGATGGTTTGGTGTACATTGAAGCAGACCCATCTGCCTCTGATTCTTGG
genomic: AGCGCAGCCCCAAGCGTCTCAAGTACACCTCCGCTTCTCGCTTCACCAAGgtttgtttgt ... taatgaacagGAGGATGGTTTGGTGTACATTGAAGCAGACCCATCTGCCTCTGATTCTTGG
EST: gi|19345870|gb|BM890750.1|BM890750
EST:     AGCGCAGCCCCAAGCGTCTCAAGTACACCTCCGCTTCTCGCTTCACCAAG                         GAGGATGGTTTGGTGTACATTGAAGCAGACCCATCTGCCTCTGATTCTTGG
genomic: AGCGCAGCCCCAAGCGTCTCAAGTACACCTCCGCTTCTCGCTTCACCAAGgtttgtttgt ... taatgaacagGAGGATGGTTTGGTGTACATTGAAGCAGACCCATCTGCCTCTGATTCTTGG