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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTCTTTCGTTCTCTCTCTCTCTCTCTTATTTGCTTCTTCGAGTTTCACAGCCAAGTCGTAAAAGgtactctctctcctctcatctttggatccccaaatctagggcttcttcttcttgtctgcgaaaatttcttgaatcactgtcttaattttcgtcatcaatt...

Basic information

species Glycine max
transcript GLYMA19G25870.2
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|7685957|gb|AW756605.1|AW756605
EST:     TTTGCTTCTTCGAGTTTCACAGCCAAGTCGTAAAAG                         GGTTTCAAGGGATGGAAAACATGCAGAGCTTCTGGCAATTGGGTGATGAAC
genomic: TTTGCTTCTTCGAGTTTCACAGCCAAGTCGTAAAAGgtactctctc ... aactttttagGGTTTCAAGGGATGGAAAACATGCAGAGCTTCTGGCAATTGGGTGATGAAC
EST: gi|192334781|gb|FK025272.1|FK025272
EST:     TATTTGCTTCTTCGAGTTTCACAGCCAAGTCGTAAAAG                         GGTTTCAAGGGATGGAAAACATGCAGAGCTTCTGGCAATTGGGTGATGAAC
genomic: TATTTGCTTCTTCGAGTTTCACAGCCAAGTCGTAAAAGgtactctctc ... aactttttagGGTTTCAAGGGATGGAAAACATGCAGAGCTTCTGGCAATTGGGTGATGAAC
EST: gi|24136953|gb|BU927463.1|BU927463
EST:     TTTGCTTCTTCGAGTTTCACAGCCAAGTCGTAAAAG                         GGTTTCAAGGGATGGAAAACATGCAGAGCTTCTGGCAATTGGGTGATGAAC
genomic: TTTGCTTCTTCGAGTTTCACAGCCAAGTCGTAAAAGgtactctctc ... aactttttagGGTTTCAAGGGATGGAAAACATGCAGAGCTTCTGGCAATTGGGTGATGAAC