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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGTTCCATTATCCTAAAAAAGAAGAAATCCACTGAGAGTGGTCGTGTTCAGAAATCAATCAAGGTTTAGCCACTCTCACTTTCCCTTCTGTGTGGGCACCgtaattttccattccctttttatgtcaatttcttgactcaaactcatcattatttattcatttaagttttacaagcttgatgattttacgtgatagttgc...

Basic information

species Glycine max
transcript GLYMA19G22690.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192301055|gb|FG990125.1|FG990125
EST:     AGGTTTAGCCACTCTCACTTTCCCTTCTGTGTGGGCACC                         GGTTATATTTGTTTGCTACTGATAAAGGATGACATCAAGTGAATGGCGTGT
genomic: AGGTTTAGCCACTCTCACTTTCCCTTCTGTGTGGGCACCgtaattttcc ... ccaaacacagGGTTATATTTGTTTGCTACTGATAAAGGATGACATCAAGTGAATGGCGTGT
EST: gi|213600041|gb|DB966501.1|DB966501
EST:     GAAATCAATCAAGGTTTAGCCACTCTCACTTTCCCTTCTGTGTGGGCACC                         GGTTATATTTGTTTGCTACTGATAAAGGATGACATCAAGTGAATGGCGTGT
genomic: GAAATCAATCAAGGTTTAGCCACTCTCACTTTCCCTTCTGTGTGGGCACCgtaattttcc ... ccaaacacagGGTTATATTTGTTTGCTACTGATAAAGGATGACATCAAGTGAATGGCGTGT