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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACCTCGCCACCGACAACCAGCGTCGGCGCACCACTGCACCAGAGCAGTAGGCCGTCGCAGTCGCACGCGGCAACCACCAGCCACCAAGTCTTCGTAGCAGgtatcgagttttgacctctgttctgttttttgtgtttttgtgattctgaaattggtaatctcattggttcagttttaaaattttccattaagctttgata...

Basic information

species Glycine max
transcript GLYMA19G06900.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|23057443|gb|BU578117.1|BU578117
EST:     GCCGTCGCAGTCGCACGCGGCAACCACCAGCCACCAAGTCTTCGTAGCAG                         ATCTGTGCTTTGGCTATGGAAAATTCAGAGAAGGTGGTCGCTGTGATCATG
genomic: GCCGTCGCAGTCGCACGCGGCAACCACCAGCCACCAAGTCTTCGTAGCAGgtatcgagtt ... gagtttaaagATCTGTGCTTTGGCTATGGAAAATTCAGAGAAGGTGGTCGCTGTGATCATG
EST: gi|21887107|gb|BQ740320.1|BQ740320
EST:     GCCGTCGCAGTCGCACGCGGCAACCACCAGCCACCAAGTCTTCGTAGCAG                         ATCTGTGCTTTGGCTATGGAAAATTCAGAGAAGGTGGTCGCTGTGATCATG
genomic: GCCGTCGCAGTCGCACGCGGCAACCACCAGCCACCAAGTCTTCGTAGCAGgtatcgagtt ... gagtttaaagATCTGTGCTTTGGCTATGGAAAATTCAGAGAAGGTGGTCGCTGTGATCATG
EST: gi|9902817|gb|BE611785.1|BE611785
EST:     GCCGTCGCAGTCGCACGCGGCAACCACCAGCCACCAAGTCTTCGTAGCAG                         ATCTGTGCTTTGGCTATGGAAAATTCAGAGAAGGTGGTCGCTGTGATCATG
genomic: GCCGTCGCAGTCGCACGCGGCAACCACCAGCCACCAAGTCTTCGTAGCAGgtatcgagtt ... gagtttaaagATCTGTGCTTTGGCTATGGAAAATTCAGAGAAGGTGGTCGCTGTGATCATG
EST: gi|209723433|gb|BW651361.1|BW651361
EST:     GCCGTCGCAGTCGCACGCGGCAACCACCAGCTACCAAGTCTTCGTAGCAG                         ATCTGTGCTTTGGCTATGGAAAATTCAGAGAAGGTGGTCGCTGTGATCATG
genomic: GCCGTCGCAGTCGCACGCGGCAACCACCAGCCACCAAGTCTTCGTAGCAGgtatcgagtt ... gagtttaaagATCTGTGCTTTGGCTATGGAAAATTCAGAGAAGGTGGTCGCTGTGATCATG
EST: gi|16996820|gb|BM086192.1|BM086192
EST:     GCCGTCGCAGTCGCACGCGGCAACCACCAGCCACCAAGTCTTCGTAGCAG                         ATCTGTGCTTTGGCTATGGAAAATTCAGAGAAGGTGGTCGCTGTGATCATG
genomic: GCCGTCGCAGTCGCACGCGGCAACCACCAGCCACCAAGTCTTCGTAGCAGgtatcgagtt ... gagtttaaagATCTGTGCTTTGGCTATGGAAAATTCAGAGAAGGTGGTCGCTGTGATCATG