1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
ACCAGCCAAAACTAGTGATTTCTTAAAAACTCTTCAGCTTGGGGCCATGTTTGCAACTTGGTACCTTTTGAACATCTACTACAACATCTACAACAAACAGgtacgttctacttattcattttcatccacacccaccatttggagacaaaaacaagactcaatttttgcaattattagtatctggggtgagagtgtgggga...
species | Glycine max |
transcript | GLYMA19G00270.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TTGCAACTTGGTACCTTTTGAACATCTACTACAACATCTACAACAAACAG GTTCTAAAAGTCTATCCATTTCCAGCAACAATTACAGCATTTCAATTTGGCEST: gi|6667939|gb|AW279390.1|AW279390
genomic: TTGCAACTTGGTACCTTTTGAACATCTACTACAACATCTACAACAAACAGgtacgttcta ... tgtctattagGTTCTAAAAGTCTATCCATTTCCAGCAACAATTACAGCATTTCAATTTGGC
EST: TTGCAACTTGGTACCTTGTGAACATCTACTACAACATCTACAACAAACAG GTTCTAAAAGTCTATCCATTTCCAGCAACAATTACAGCATTTCAATTTGGCEST: gi|12688506|gb|BG154842.1|BG154842
genomic: TTGCAACTTGGTACCTTTTGAACATCTACTACAACATCTACAACAAACAGgtacgttcta ... tgtctattagGTTCTAAAAGTCTATCCATTTCCAGCAACAATTACAGCATTTCAATTTGGC
EST: TTGCAACTTGGTACCTTTTGAACATCTACTACAACATCTACAACAAACAG GTTCTAAAAGTCTATCCATTTCCAGCAACAATTACAGCATTTCAATTTGGC
genomic: TTGCAACTTGGTACCTTTTGAACATCTACTACAACATCTACAACAAACAGgtacgttcta ... tgtctattagGTTCTAAAAGTCTATCCATTTCCAGCAACAATTACAGCATTTCAATTTGGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACCAGCCAAAACTAGTGATTTCTTAAAAACTCTTCAGCTTGGGGCCATGTTTGCAACTTGGTACCTTTTGAACATCTACTACAACATCTACAACAAACAGgtacgttctacttattcattttcatccacacccaccatttggagacaaaaacaagactcaatttttgcaattattagtatctggggtgagagtgtgggga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cacaccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaaacaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggggtga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gtgtggg