1 5' 3' | 2 5' 3' | 3 5' 3' |
ATGGCAGACGCTGAGGATATTCAACCTCTTGTTTGTGACAATGGAACAGGAATGGTTAAGgtacatgatggatcttttgtttttgtattatttgttgaataaacttactgtcatactcttgttggttttatgggaatatcattttacattaatgttacttttgtgaatttgaaaaattaattgcaacaaatatttgtag
species | Glycine max |
transcript | GLYMA18G52780.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CTGAGGATATTCAACCTCTTGTTTGTGACAATGGAACAGGAATGGTTAAG GCTGGTTTTGCTGGAGATGATGCCCCACGTGCTGTGTTTCCCAGCATTGTAEST: gi|151400056|gb|EV269870.1|EV269870
genomic: CTGAGGATATTCAACCTCTTGTTTGTGACAATGGAACAGGAATGGTTAAGgtacatgatg ... atatttgtagGCTGGTTTTGCTGGAGATGATGCCCCACGTGCTGTGTTTCCCAGCATTGTA
EST: CTGAGGATATTCAACCTCTTGTTTGTGACAATGGAACAGGAATGGTTAAG GCTGGTTTTGCTGGAGATGATGCCCCACGTGCTGTGTTTCCCAGCATTGTAEST: gi|15814304|gb|BI786579.1|BI786579
genomic: CTGAGGATATTCAACCTCTTGTTTGTGACAATGGAACAGGAATGGTTAAGgtacatgatg ... atatttgtagGCTGGTTTTGCTGGAGATGATGCCCCACGTGCTGTGTTTCCCAGCATTGTA
EST: CTGAGGATATTCAACCTCTTGTTTGTGACAATGGAACAGGAATGGTTAAG GCTGGTTTTGCTGGAGATGATGCCCCACGTGCTGTGTTTCCCAGCATTGTA
genomic: CTGAGGATATTCAACCTCTTGTTTGTGACAATGGAACAGGAATGGTTAAGgtacatgatg ... atatttgtagGCTGGTTTTGCTGGAGATGATGCCCCACGTGCTGTGTTTCCCAGCATTGTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGGCAGACGCTGAGGATATTCAACCTCTTGTTTGTGACAATGGAACAGGAATGGTTAAGgtacatgatggatcttttgtttttgtattatttgttgaataaacttactgtcatactcttgttggttttatgggaatatcattttacattaatgttacttttgtgaatttgaaaaattaattgcaacaaatatttgtag
- - - - - - GAGGAT