1 5' 3' | 2 5' 3' | 3 5' 3' |
ACCTAGTCCAAGCATCCCTGAGATTTCATCATCATCACCTTCCCCTGGCGGCTCTCTTGCAAGAGTTGCACAAAGTTACCCTCCTGGATTTCCCAGAAAGgtaaccaacaacccaacacttaaattataccctggttttaattttcattctttgaaaaagtttgtgccttgaaacacacaaacttctatatgggttgtca...
species | Glycine max |
transcript | GLYMA18G49410.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GCTCTCTTGCAAGAGTTGCACAAAGTTACCCTCCTGGATTTCCCAGAAAG GTATTTGCGGAGGTTATAGGGACATTTCTGTTAGTGTTTGTGGGGAGTGGTEST: gi|209715044|gb|BW677087.1|BW677087
genomic: GCTCTCTTGCAAGAGTTGCACAAAGTTACCCTCCTGGATTTCCCAGAAAGgtaaccaaca ... attatggcagGTATTTGCGGAGGTTATAGGGACATTTCTGTTAGTGTTTGTGGGGAGTGGT
EST: GCTCTCTTGCAAGAGTTGCACAAAGTTACCCTCCTGGATTTCCCAGAAAG GTATTTGCGGAGGTTATAGGGACATTTCTGTTAGTGTTTGTGGGGAGTGGTEST: gi|208192702|gb|GD994205.1|GD994205
genomic: GCTCTCTTGCAAGAGTTGCACAAAGTTACCCTCCTGGATTTCCCAGAAAGgtaaccaaca ... attatggcagGTATTTGCGGAGGTTATAGGGACATTTCTGTTAGTGTTTGTGGGGAGTGGT
EST: GGATTTCCCAGAAAG GTATTTGCGGAGGTTATAGGGATATTTCTGTTAGTGTTTGTGGGGAGTGGTEST: gi|192297066|gb|FG990337.1|FG990337
genomic: GGATTTCCCAGAAAGgtaaccaaca ... attatggcagGTATTTGCGGAGGTTATAGGGACATTTCTGTTAGTGTTTGTGGGGAGTGGT
EST: GCTCTCTTGCAAGAGTTGCACAAAGTTACCCTCCTGGATTTCCCAGAAAG GTATTTGCGGAGGTTATAGGGACATTTCTGTTAGTGTTTGTGGGGAGTGGTEST: gi|31458073|gb|CD400101.1|CD400101
genomic: GCTCTCTTGCAAGAGTTGCACAAAGTTACCCTCCTGGATTTCCCAGAAAGgtaaccaaca ... attatggcagGTATTTGCGGAGGTTATAGGGACATTTCTGTTAGTGTTTGTGGGGAGTGGT
EST: GCTCTCTTGCAAGAGTTGCACAAAGTTACCCTCCTGGATTTCCCAGAAAG GTATTTGCGGAGGTTATAGGGACATTTCTGTTAGTGTTTGTGGGGAGTGGTEST: gi|31461708|gb|CD403736.1|CD403736
genomic: GCTCTCTTGCAAGAGTTGCACAAAGTTACCCTCCTGGATTTCCCAGAAAGgtaaccaaca ... attatggcagGTATTTGCGGAGGTTATAGGGACATTTCTGTTAGTGTTTGTGGGGAGTGGT
EST: GCTCTCTTGCAAGAGTTGCACAAAGTTACCCTCCTGGATTTCCCAGAAAG GTATTTGCGGAGGTTATAGGGACATTTCTGTTAGTGTTTGTGGGGAGTGGT
genomic: GCTCTCTTGCAAGAGTTGCACAAAGTTACCCTCCTGGATTTCCCAGAAAGgtaaccaaca ... attatggcagGTATTTGCGGAGGTTATAGGGACATTTCTGTTAGTGTTTGTGGGGAGTGGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACCTAGTCCAAGCATCCCTGAGATTTCATCATCATCACCTTCCCCTGGCGGCTCTCTTGCAAGAGTTGCACAAAGTTACCCTCCTGGATTTCCCAGAAAGgtaaccaacaacccaacacttaaattataccctggttttaattttcattctttgaaaaagtttgtgccttgaaacacacaaacttctatatgggttgtca
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