Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|213616558|gb|DB967194.1|DB967194EST: TTTCTCTGCAGTACTCAATTGATCCCTTTGTTTTTCTATTCGTTCTGAGA GCTTTGTGTGTATGGCCGGCATAGACTTGGGTTCAGCATCACATTTTGTTC
genomic: TTTCTCTGCAGTACTCAATTGATCCCTTTGTTTTTCTATTCGTTCTGAGGtttgaatcat ... cttctttagaGCTTTGTGTGTATGGCCGGCATAGACTTGGGTTCAGCATCACATTTTGTTC
EST:
gi|254333567|gb|GR848485.1|GR848485EST: AATTGATCCCTTTGTTTTTCTATTCGTTCTGAGA GCTTTGTGTGTATGGCCGGCATAGACTTGGGTTCAGCATCACATTTTGTTC
genomic: AATTGATCCCTTTGTTTTTCTATTCGTTCTGAGGtttgaatcat ... cttctttagaGCTTTGTGTGTATGGCCGGCATAGACTTGGGTTCAGCATCACATTTTGTTC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GCCCACTTTATTTGTCTCTCTCTTTCCCTTCCAACCTCATCCCATTCCGTTTTCTCTGCAGTACTCAATTGATCCCTTTGTTTTTCTATTCGTTCTGAGGtttgaatcattgggcactccctaatacttcttttaaaattccctgtacataatttaattcttcatgttactattctaattaaattcctcttattttaattactccaattttttattttattttatttcctcttgtttttctgtttacacttctttaga
- - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG