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ATCAGTGTAATGGCGAAGGAAGATGGtgagtgagatcaaattatctgtttggatgctgagaaaattttaatctgcggaaaataaagtaacaacaccacacaacacactttgctatgctattttcat...
species | Glycine max |
transcript | GLYMA18G46610.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GGCGAAGGAAGATGT GTTTGAGTTCCTCGGGAACGTTCCTCTGCTACAGAGG-TTCCTGGCTCGTCEST: gi|192299097|gb|FG990411.1|FG990411
genomic: GGCGAAGGAAGATGGtgagtgagat ... ttgttgcagtGTTTGAGTTCCTCGGGAACGTTCCTCTGCTACAGAGGCTTCCTGGCTCGTC
EST: AGTGTAATGGCGAAGGAAGATGT GTTTGAGCTCCTCGGGAACGTTCCTCTGCTACAGAGGCTTCCTGGCTCGTCEST: gi|192328575|gb|FK023565.1|FK023565
genomic: AGTGTAATGGCGAAGGAAGATGGtgagtgagat ... ttgttgcagtGTTTGAGTTCCTCGGGAACGTTCCTCTGCTACAGAGGCTTCCTGGCTCGTC
EST: AGTGTAATGGCGAAGGAAGATGT GTTTGAGTTCCTCGGGAACGTTCCTCTGCTACAGAGGCTTCCTGGCTCGTCEST: gi|254319562|gb|GR829074.1|GR829074
genomic: AGTGTAATGGCGAAGGAAGATGGtgagtgagat ... ttgttgcagtGTTTGAGTTCCTCGGGAACGTTCCTCTGCTACAGAGGCTTCCTGGCTCGTC
EST: GCGAAGGAAGATGT GTTTGAGTTCCTCGGGAACGTTCCTCTGCTACAGAGGCTTCCTGGCTCGTCEST: gi|17401910|gb|BM178692.1|BM178692
genomic: GCGAAGGAAGATGGtgagtgagat ... ttgttgcagtGTTTGAGTTCCTCGGGAACGTTCCTCTGCTACAGAGGCTTCCTGGCTCGTC
EST: GTAATGGCGAAGGAAGATGT GTTTGAGTTCCTCGGGAACGTTCCTCTGCTACAGAGGCTTCCTGGCTCGTCEST: gi|192295537|gb|FG988111.1|FG988111
genomic: GTAATGGCGAAGGAAGATGGtgagtgagat ... ttgttgcagtGTTTGAGTTCCTCGGGAACGTTCCTCTGCTACAGAGGCTTCCTGGCTCGTC
EST: ATCAGTGTAATGGCGAAGGAAGATGT GTTTGAGTTCCTCGGGAACGTTCCTCTGCTACAGAGGCTTCCTGGCTCGTCEST: gi|298178438|gb|HO024173.1|HO024173
genomic: ATCAGTGTAATGGCGAAGGAAGATGGtgagtgagat ... ttgttgcagtGTTTGAGTTCCTCGGGAACGTTCCTCTGCTACAGAGGCTTCCTGGCTCGTC
EST: ATCAGTGTAATGGCGAAGGAAGATGT GTTTGCGTTCCTCGGGAACGTTCCTCTGCTACAGAGGCTTCCTGGCTCGTC
genomic: ATCAGTGTAATGGCGAAGGAAGATGGtgagtgagat ... ttgttgcagtGTTTGAGTTCCTCGGGAACGTTCCTCTGCTACAGAGGCTTCCTGGCTCGTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATCAGTGTAATGGCGAAGGAAGATGGtgagtgagatcaaattatctgtttggatgctgagaaaattttaatctgcggaaaataaagtaacaacaccacacaacacactttgctatgctattttcat
- - - - - - - AAGGAA
- - - - - - - - GGAAGA
- - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ggaaaata