Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|254316326|gb|GR827863.1|GR827863EST: TTCATATTTTCTCTTAACTGCTGATTATGAACCTACTGTTCTAGACCCTA TTAAGAAGGGATTGCTTTCAGCTGAGAGCACTGTGAAAGAGTATGTTTTTG
genomic: TTCATATTTTCTCTTAACTGCTGATTATGAACCTACTGTTCTAGACCCTGtaagtctcta ... taattgcagaTTAAGAAGGGATTGCTTTCAGCTGAGAGCACTGTGAAAGAGTATGTTTTTG
EST:
gi|208094733|gb|GD896530.1|GD896530EST: TTCATATTTTCTCTTAACTGCTGATTATGAACCTACTGTTCTAGACCCTA TTAAGAAGGGATTGCTTTCAGCTGAGAGCACTGTGAAAGAGTATGTTTTTG
genomic: TTCATATTTTCTCTTAACTGCTGATTATGAACCTACTGTTCTAGACCCTGtaagtctcta ... taattgcagaTTAAGAAGGGATTGCTTTCAGCTGAGAGCACTGTGAAAGAGTATGTTTTTG
EST:
gi|254329208|gb|GR833580.1|GR833580EST: TTCATATTTTCTCTTAACTGCTGATTATGAACCTACTGTTCTAGACCCTA TTAAGAAGGGATTGCTTTCAGCTGAGAGCACTGTGAAAGAGTATGTTTTTG
genomic: TTCATATTTTCTCTTAACTGCTGATTATGAACCTACTGTTCTAGACCCTGtaagtctcta ... taattgcagaTTAAGAAGGGATTGCTTTCAGCTGAGAGCACTGTGAAAGAGTATGTTTTTG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CAAGCGGACAGGGTTGTTAGAAGAGTAACCATGATAGCAACTATAACTGCTTCATATTTTCTCTTAACTGCTGATTATGAACCTACTGTTCTAGACCCTGtaagtctctatctctatctcttaatgcccattcgtcatttttcacaaatttagaacctttgtagaaatggctttgattgatttttactcactctttgttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT