1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CTGCCAATGCCTCCGTCAAGTGGAAAGGGGCATGCTTCTTCGATAACACCGCCAAGATTGAGTTCGCACCCTCTTTGGAGGGTGCCACTCTCTATCTCAAggtcatcttccgaattttatatttgtttaattaccatagcatgtttctgcatttatgaatatactagaatcaagattagtaactttgattgaaaaaggta...
species | Glycine max |
transcript | GLYMA18G17350.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GCCAAGATTGAGTTCGCACCCTCTTTGGAGGGTGCCACTCTCTATCTCAA GACAGAGGCTGCACATAGCTGGACCTGCATGGATTTGTATGTTTTTGCAACEST: gi|209719679|gb|BW651053.1|BW651053
genomic: GCCAAGATTGAGTTCGCACCCTCTTTGGAGGGTGCCACTCTCTATCTCAAggtcatcttc ... cttttttacaGACAGAGGCTGCACATAGCTGGACCTGCATGGATTTGTATGTTTTTGCAAC
EST: GCCAAGATTGAGTTCGCACCCTCTTTGGAGGGTGCCACTCTCTATCTCAA GACAGAGGCTGCACATAGCTGGACCTGCATGGATTTGTATGTTTTTGCAACEST: gi|15664414|gb|BI701785.1|BI701785
genomic: GCCAAGATTGAGTTCGCACCCTCTTTGGAGGGTGCCACTCTCTATCTCAAggtcatcttc ... cttttttacaGACAGAGGCTGCACATAGCTGGACCTGCATGGATTTGTATGTTTTTGCAAC
EST: GCCAAGATTGAGTTCGCACCCTCTTTGGAGGGTGCCACTCTCTATCTCAA GACAGAGGCTGCACATAGCTGGACCTGCATGGATTTGTATGTTTTTGCAACEST: gi|19348918|gb|BM893450.1|BM893450
genomic: GCCAAGATTGAGTTCGCACCCTCTTTGGAGGGTGCCACTCTCTATCTCAAggtcatcttc ... cttttttacaGACAGAGGCTGCACATAGCTGGACCTGCATGGATTTGTATGTTTTTGCAAC
EST: GCCAAGATTGAGTTCGCACCCTCTTTGGAGGGTGCCACTCTCTATCTCAA GACAGAGGCTGCACATAGCTGGACCTGCATGGATTTGTATGTTTTTGCAACEST: gi|213614818|gb|DB956954.1|DB956954
genomic: GCCAAGATTGAGTTCGCACCCTCTTTGGAGGGTGCCACTCTCTATCTCAAggtcatcttc ... cttttttacaGACAGAGGCTGCACATAGCTGGACCTGCATGGATTTGTATGTTTTTGCAAC
EST: GCCAAGATTGAGTTCGCACCCTCTTTGGAGGGTGCCACTCTCTATCTCAA GACAGAGGCTGCACATAGCTGGACCTGCATGGATTTGTATGTTTTTGCAACEST: gi|9820212|gb|BE555722.1|BE555722
genomic: GCCAAGATTGAGTTCGCACCCTCTTTGGAGGGTGCCACTCTCTATCTCAAggtcatcttc ... cttttttacaGACAGAGGCTGCACATAGCTGGACCTGCATGGATTTGTATGTTTTTGCAAC
EST: GCCAAGATTGAGTTCGCACCCTCTTTGGAGGGTGCCACTCTCTATCTCAA GACAGAGGCTGCACATAGCTGGACCTGCATGGATTTGTATGTTTTTGCAAC
genomic: GCCAAGATTGAGTTCGCACCCTCTTTGGAGGGTGCCACTCTCTATCTCAAggtcatcttc ... cttttttacaGACAGAGGCTGCACATAGCTGGACCTGCATGGATTTGTATGTTTTTGCAAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGCCAATGCCTCCGTCAAGTGGAAAGGGGCATGCTTCTTCGATAACACCGCCAAGATTGAGTTCGCACCCTCTTTGGAGGGTGCCACTCTCTATCTCAAggtcatcttccgaattttatatttgtttaattaccatagcatgtttctgcatttatgaatatactagaatcaagattagtaactttgattgaaaaaggta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaaaaagg