Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCCGACCATTCCTCCGTCCATCTCTGCCGGAATTTCAAGCTCCGACCCCTTTCCGGCTATTCTCTGTCCCAAACTTTTCCACTCGCGTTTCTCCGATCGCcgtaagcatccgcttcattcatttccttacacttttttcgcactcgattttgatcttgtgctgctgctgctgctgctgctgctgttgaatcaagtaacaa...

Basic information

species Glycine max
transcript GLYMA18G08770.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|21993906|gb|BQ785434.1|BQ785434
EST:     TTCCGGCTATTCTCTGTCCCAAACTTTTCCACTCGCGTTTCTCCGATCGC                         CATTACAAAATTACCTGGGACTGAGGTATTCTCACAATTTGAGTCCGGTAA
genomic: TTCCGGCTATTCTCTGTCCCAAACTTTTCCACTCGCGTTTCTCCGATCGCcgtaagcatc ... ttcttttgcaGATTACAAAATTACCTGGGACTGAGGTATTCTCACAATTTGAGTCCGGTAA
EST: gi|15286187|gb|BI470078.1|BI470078
EST:     TTCCGGCTATTCTCTGTCCCAAACTTTTCCACTCGCGTTTCTCCGATCGC                         CATTACAAAATTACCTGGGACTGAGGTATTCTCACAATTTGAGTCCGGTAA
genomic: TTCCGGCTATTCTCTGTCCCAAACTTTTCCACTCGCGTTTCTCCGATCGCcgtaagcatc ... ttcttttgcaGATTACAAAATTACCTGGGACTGAGGTATTCTCACAATTTGAGTCCGGTAA
EST: gi|9259192|gb|BE347339.1|BE347339
EST:     TTCCGGCTATTCTCTGTCCCAAACTTTTCCACTCGCGTTTCTCCGATCGC                         CATTACAAAATTACCTGGGACTGAGGTATTC
genomic: TTCCGGCTATTCTCTGTCCCAAACTTTTCCACTCGCGTTTCTCCGATCGCcgtaagcatc ... ttcttttgcaGATTACAAAATTACCTGGGACTGAGGTATTC