1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
ATGAAGAAGTCTTCGGGAAGCGCAGCTGACAAGAAGAGGGTGCGACGGTCCTCCGCCCTAGATCCCACCTCCGACGCCCCTCCAAGGgttagggtttctaattcccatctctatttttttattcccaaatctctctctctactctgttgctctcattgttaatctgactcgacgtccattttcgttg...
species | Glycine max |
transcript | GLYMA18G07900.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GGGTGCGACGGTCCTCCGCCCTAGATCCCACCTCCGACGCCCCTCCAAGG AAACAAGCTGTCAAGAAAGATGTGTTCCGGGTGTTTGCTGAGAAGGTTAGAEST: gi|298173185|gb|HO020169.1|HO020169
genomic: GGGTGCGACGGTCCTCCGCCCTAGATCCCACCTCCGACGCCCCTCCAAGGgttagggttt ... ttgttttcagAAACAAGCTGTCAAGAAAGATGTGTTCCGGGTGTTTGCTGAGAAGGTTAGA
EST: GGGTGCGACGGTCCTCCGCCCTAGATCCCACCTCCGACGCCCCTCCAAGG AAACAAGCTGTCAAGAAAGATGTGTTCCGGGTGTTTGCTGAGAAGGTTAGAEST: gi|298170205|gb|HO018829.1|HO018829
genomic: GGGTGCGACGGTCCTCCGCCCTAGATCCCACCTCCGACGCCCCTCCAAGGgttagggttt ... ttgttttcagAAACAAGCTGTCAAGAAAGATGTGTTCCGGGTGTTTGCTGAGAAGGTTAGA
EST: GGGTGCGACGGTCCTCCGCCCTAGATCCCACCTCCGACGCCCCTCCAAGG AAACAAGCTGTCAAGAAAGATGTGTTCCGGGTGTTTGCTGAGAAGGTTAGAEST: gi|298174039|gb|HO017375.1|HO017375
genomic: GGGTGCGACGGTCCTCCGCCCTAGATCCCACCTCCGACGCCCCTCCAAGGgttagggttt ... ttgttttcagAAACAAGCTGTCAAGAAAGATGTGTTCCGGGTGTTTGCTGAGAAGGTTAGA
EST: GGGTGCGACGGTCCTCCGCCCTAGATCCCACCTCCGACGCCCCTCCAAGG AAACAAGCTGTCAAGAAAGATGTGTTCCGGGTGTTTGCTGAGAAGGTTAGAEST: gi|9901448|gb|BE610416.1|BE610416
genomic: GGGTGCGACGGTCCTCCGCCCTAGATCCCACCTCCGACGCCCCTCCAAGGgttagggttt ... ttgttttcagAAACAAGCTGTCAAGAAAGATGTGTTCCGGGTGTTTGCTGAGAAGGTTAGA
EST: GGGTGCGACGGTCCTCCGCCCTAGATCCCACCTCCGACGCCCCTCCAAGG AAACAAGCTGTCAAGAAAGATGTGTTCCGGGTGTTTGCTGAGAAGGTTAGAEST: gi|151396851|gb|EV266724.1|EV266724
genomic: GGGTGCGACGGTCCTCCGCCCTAGATCCCACCTCCGACGCCCCTCCAAGGgttagggttt ... ttgttttcagAAACAAGCTGTCAAGAAAGATGTGTTCCGGGTGTTTGCTGAGAAGGTTAGA
EST: GGGTGCGACGGTCCTCCGCCCTAGATCCCACCTCCGACGCCCCTCCAAGG AAACAAGCTGTCAAGAAAGATGTGTTCCGGGTGTTTGCTGAGAAGGTTAGAEST: gi|298187066|gb|HO034215.1|HO034215
genomic: GGGTGCGACGGTCCTCCGCCCTAGATCCCACCTCCGACGCCCCTCCAAGGgttagggttt ... ttgttttcagAAACAAGCTGTCAAGAAAGATGTGTTCCGGGTGTTTGCTGAGAAGGTTAGA
EST: GGGTGCGACGGTCCTCCGCCCTAGATCCCACCTCCGACGCCCCTCCAAGG AAACAAGCTGTCAAGAAAGATGTGTTCCGGGTGTTTGCTGAGAAGGTTAGAEST: gi|151409640|gb|EV279448.1|EV279448
genomic: GGGTGCGACGGTCCTCCGCCCTAGATCCCACCTCCGACGCCCCTCCAAGGgttagggttt ... ttgttttcagAAACAAGCTGTCAAGAAAGATGTGTTCCGGGTGTTTGCTGAGAAGGTTAGA
EST: GGGTGCGACGGTCCTCCGCCCTAGATCCCCCCTCCGACGCCCCTCCAAGG AAACAAGCTGTCAAGAAAGATGTGTTCCGGGTGTTTGCTGAGAAGGTTAGAEST: gi|298169444|gb|HO020804.1|HO020804
genomic: GGGTGCGACGGTCCTCCGCCCTAGATCCCACCTCCGACGCCCCTCCAAGGgttagggttt ... ttgttttcagAAACAAGCTGTCAAGAAAGATGTGTTCCGGGTGTTTGCTGAGAAGGTTAGA
EST: GGGTGCGACGGTCCTCCGCCCTAGATCCCACCTCCGACGCCCCTCCAAGG AAACAAGCTGTCAAGAAAGATGTGTTCCGGGTGTTTGCTGAGAAGGTTAGAEST: gi|298190464|gb|HO032585.1|HO032585
genomic: GGGTGCGACGGTCCTCCGCCCTAGATCCCACCTCCGACGCCCCTCCAAGGgttagggttt ... ttgttttcagAAACAAGCTGTCAAGAAAGATGTGTTCCGGGTGTTTGCTGAGAAGGTTAGA
EST: GGGTGCGACGGTCCTCCGCCCTAGATCCCACCTCCGACGCCCCTCCAAGG AAACAAGCTGTCAAGAAAGATGTGTTCCGGGTGTTTGCTGAGAAGGTTAGAEST: gi|19935346|gb|BQ080376.1|BQ080376
genomic: GGGTGCGACGGTCCTCCGCCCTAGATCCCACCTCCGACGCCCCTCCAAGGgttagggttt ... ttgttttcagAAACAAGCTGTCAAGAAAGATGTGTTCCGGGTGTTTGCTGAGAAGGTTAGA
EST: CCTCCGCCCTAGATCCCACCTCCGACGCCCCTCCAAGG AAACAAGCTGTCAAGAAAGATGTGTTCCGGGTGTTTGCTGAGAAGGTTAGA
genomic: CCTCCGCCCTAGATCCCACCTCCGACGCCCCTCCAAGGgttagggttt ... ttgttttcagAAACAAGCTGTCAAGAAAGATGTGTTCCGGGTGTTTGCTGAGAAGGTTAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGAAGAAGTCTTCGGGAAGCGCAGCTGACAAGAAGAGGGTGCGACGGTCCTCCGCCCTAGATCCCACCTCCGACGCCCCTCCAAGGgttagggtttctaattcccatctctatttttttattcccaaatctctctctctactctgttgctctcattgttaatctgactcgacgtccattttcgttg
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