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ACAGAGACCGAGGTCGCCGCCATGTCAATGTCGGATTCCGATTCCTCCTCCTCCTCTTATGGCGCTGAATACAAGAGTCTCAAACAAGTTAGCCGCGACCgtgagtatctcttcctttttttttttgtaattaattcatttgattcctgattcctgattcgcttctctcagcaattcgcatttaagttctgaactcactt...
species | Glycine max |
transcript | GLYMA17G14450.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CTCCTCTTATGGCGCTGAATACAAGAGTCTCAAACAAGTTAGCCGCGACC GATTATTACATGAAATGCTTAGGTCAGCGAAAACAGGAGATTCAAAATCTAEST: gi|207830531|gb|GD802881.1|GD802881
genomic: CTCCTCTTATGGCGCTGAATACAAGAGTCTCAAACAAGTTAGCCGCGACCgtgagtatct ... ttttctgcagGATTATTACATGAAATGCTTAGGTCAGCGAAAACAGGAGATTCAAAATCTA
EST: CTCCTCTTATGGCGCTGAATACAAGAGTCTCAAACAAGTTAGCCGCGACC GATTATTACATGAAATGCTTAGGTCAGCGAAAACAGGAGATTCAAAATCTAEST: gi|209720987|gb|BW682466.1|BW682466
genomic: CTCCTCTTATGGCGCTGAATACAAGAGTCTCAAACAAGTTAGCCGCGACCgtgagtatct ... ttttctgcagGATTATTACATGAAATGCTTAGGTCAGCGAAAACAGGAGATTCAAAATCTA
EST: CTCCTCTTATGGCGCTGAATACAAGAGTCTCAAACAAGTTAGCCGCGACC GATTATTACATGAAATGCTTAGEST: gi|10237389|gb|BE806277.1|BE806277
genomic: CTCCTCTTATGGCGCTGAATACAAGAGTCTCAAACAAGTTAGCCGCGACCgtgagtatct ... ttttctgcagGATTATTACATGAAATGCTTAG
EST: CTCCTCTTATGGCGCTGAATACAAGAGTCTCAAACAAGTTAGCCGCGACC GATTATTACATGAAATGCTTAGGTCAGCGAAAACAGGAGATTCAAAATCTAEST: gi|193730259|gb|FK667431.1|FK667431
genomic: CTCCTCTTATGGCGCTGAATACAAGAGTCTCAAACAAGTTAGCCGCGACCgtgagtatct ... ttttctgcagGATTATTACATGAAATGCTTAGGTCAGCGAAAACAGGAGATTCAAAATCTA
EST: CTCCTCTTATGGCGCTGAATACAAGAGTCTCAAACAAGTTAGCCGCGACC GATTATTACATGAAATGCTTAGGTCAGCGAAAACAGGAGATTCAAAATCTAEST: gi|213610646|gb|DB961121.1|DB961121
genomic: CTCCTCTTATGGCGCTGAATACAAGAGTCTCAAACAAGTTAGCCGCGACCgtgagtatct ... ttttctgcagGATTATTACATGAAATGCTTAGGTCAGCGAAAACAGGAGATTCAAAATCTA
EST: CTCCTCTTATGGCGCTGAATACAAGAGTCTCAAACAAGTTAGCCGCGACC GATTATTACATGAAATGCTTAGGTCAGCGAAAACAGGAGATTCAAAATCTA
genomic: CTCCTCTTATGGCGCTGAATACAAGAGTCTCAAACAAGTTAGCCGCGACCgtgagtatct ... ttttctgcagGATTATTACATGAAATGCTTAGGTCAGCGAAAACAGGAGATTCAAAATCTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACAGAGACCGAGGTCGCCGCCATGTCAATGTCGGATTCCGATTCCTCCTCCTCCTCTTATGGCGCTGAATACAAGAGTCTCAAACAAGTTAGCCGCGACCgtgagtatctcttcctttttttttttgtaattaattcatttgattcctgattcctgattcgcttctctcagcaattcgcatttaagttctgaactcactt
- - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctcttcc