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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCGCCACTGGTTTCGATCCCACACCCACAACCCTCCATCCTTCGAATGCTCTTGCGTTTTCCTTAAACTGCCTCATTCCGAAGCCATACACACATAACGGgtggggtgactcaatttcttcctccattttcaattaaactgctttttattattatttgttaattttgttgtcttgtttgctcgaatttccgttttctatg...

Basic information

species Glycine max
transcript GLYMA17G10640.2
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|16106211|gb|BI893951.1|BI893951
EST:     CTTGCGTTTTCCTTAAACTGCCTCATTCCGAAGCCATACACACATAACGGTTTTTCTAG                 
genomic: CTTGCGTTTTCCTTAAACTGCCTCATTCCGAAGCCATACACACATAAC-G--------Ggtggggtgac ... gt
EST: gi|254335069|gb|GR844854.1|GR844854
EST:     CTTGCGTTTTCCTTAAACTGCCTCATTCCGAAGCCATACACACATAACGGTTTTTCTAG                 
genomic: CTTGCGTTTTCCTTAAACTGCCTCATTCCGAAGCCATACACACATAAC-G--------Ggtggggtgac ... gt
EST: gi|192330437|gb|FK021196.1|FK021196
EST:     CTTGCGTTTTCCTTAAACTGCCTCATTCCGAAGCCATACACACATAACGGTTTTTCTAG                 
genomic: CTTGCGTTTTCCTTAAACTGCCTCATTCCGAAGCCATACACACATAAC-G--------Ggtggggtgac ... gt
EST: gi|254331190|gb|GR843309.1|GR843309
EST:     CTTGCGTTTTCCTTAAACTGCCTCATTCCGAAGCCATACACACATAACGGTTTTTCTAG                 
genomic: CTTGCGTTTTCCTTAAACTGCCTCATTCCGAAGCCATACACACATAAC-G--------Ggtggggtgac ... gt
EST: gi|48575423|gb|CO036396.1|CO036396
EST:     CTTGCGTTTTCCTTAAACTGCCTCATTCCGAAGCCATACACACATAACGG                         GTGCTAGCAATGTCGACTCCTGCTAGGAAGAGGCTCATGAGAGATTTCAAG
genomic: CTTGCGTTTTCCTTAAACTGCCTCATTCCGAAGCCATACACACATAACGGgtggggtgac ... gtttttctagGTGCTAGCAATGTCGACTCCTGCTAGGAAGAGGCTCATGAGAGATTTCAAG
EST: gi|16996966|gb|BM086338.1|BM086338
EST:     CTTGCGTTTTCCTTAAACTGCCTCATTCCGAAGCCATACACACATAACGGTTTTTCTAG                 
genomic: CTTGCGTTTTCCTTAAACTGCCTCATTCCGAAGCCATACACACATAAC-G--------Ggtggggtgac ... gt
EST: gi|192331366|gb|FK021034.1|FK021034
EST:     CTTGCGTTTTCCTTAAACTGCCTCATTCCGAAGCCATACACACATAACGGTTTTTCTAG                 
genomic: CTTGCGTTTTCCTTAAACTGCCTCATTCCGAAGCCATACACACATAAC-G--------Ggtggggtgac ... gt
EST: gi|14259666|gb|BG882574.1|BG882574
EST:     CTTGCGTTTTCCTTAAACTGCCTCATTCCGAAGCCATACACACATAACGGTTTTTCTAG                 
genomic: CTTGCGTTTTCCTTAAACTGCCTCATTCCGAAGCCATACACACATAAC-G--------Ggtggggtgac ... gt
EST: gi|254317221|gb|GR826166.1|GR826166
EST:     CTTGCGTTTTCCTTAAACTGCCTCATTCCGAAGCCATACACACATAACGGTTTTTCTAG                 
genomic: CTTGCGTTTTCCTTAAACTGCCTCATTCCGAAGCCATACACACATAAC-G--------Ggtggggtgac ... gt