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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTTATTGAAATCCTTCCTCAGTCTTCTCCCATTTTCCAGAGTTCTTAAAAATTGATGCTTCCTTACAAGTCTTTCTGAGCATTCCGTTTCCTTCCTCCAGgtaccatcttgctttctcttttacaagtttcgattttgatgattccgctgttgagagaagccctttaatccatctgggtgttcccagaattttgttttct...

Basic information

species Glycine max
transcript GLYMA17G08450.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|8284367|gb|BE021926.1|BE021926
EST:     ATTGATGCTTCCTTACAAGTCTTTCTGAGCATTCCGTTTCCTTCCTCCAG                         GGAAAAGTTAGCGTGTCTTTAGGTCACAGGATTTTGAGAGATTTACTTTTT
genomic: ATTGATGCTTCCTTACAAGTCTTTCTGAGCATTCCGTTTCCTTCCTCCAGgtaccatctt ... gtctttgcagGGAAAAGTTAGCGTGTCTTTAGGTCACAGGATTTTGAGAGATTTACTTTTT
EST: gi|208173898|gb|GD966809.1|GD966809
EST:     ATTGATGCTTCCTTACAAGTCTTTCTGAGCATTCCGTTTCCTTCCTCCAG                         GGAAA-GTTAGCGTGTCTTTAGGTCA
genomic: ATTGATGCTTCCTTACAAGTCTTTCTGAGCATTCCGTTTCCTTCCTCCAGgtaccatctt ... gtctttgcagGGAAAAGTTAGCGTGTCTTTAGGTCA
EST: gi|209720593|gb|BW675040.1|BW675040
EST:     ATTGATGCTTCCTTACAAGTCTTTCTGAGCATTCCGTTTCCTTCCTCCAG                         GGAAAAGTTAGCGTGTCTTTAGGTCACAGGATTTTGAGAGATTTACTTTTT
genomic: ATTGATGCTTCCTTACAAGTCTTTCTGAGCATTCCGTTTCCTTCCTCCAGgtaccatctt ... gtctttgcagGGAAAAGTTAGCGTGTCTTTAGGTCACAGGATTTTGAGAGATTTACTTTTT