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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTGGACTTTCAATTCCAACTAAGGCAAAACCAAAACTCATTTCATGTAATTCATTTTCTCTCTCCCCCCGAACACTCAAGTTTTATCTCTCAGCCTCAGgtagtagcaccttcgttttcttgctttatgttttacctttgctttgtcccgttttttcttcaatttttcagctcgaccaaaacaactttttttttcttttacttcgttactgactttttttttcttttgtttttcggaag

Basic information

species Glycine max
transcript GLYMA17G07290.2
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209725842|gb|BW654705.1|BW654705
EST:     TTCATTTTCTCTCTCCCCCCGAACACTCAAGTTTTATCTCTCAGCCTCAG                         TTTGCTGCTAGAGGTTGCATATTTGGGGTTTCACACGTGCGCAATTTGAAG
genomic: TTCATTTTCTCTCTCCCCCCGAACACTCAAGTTTTATCTCTCAGCCTCAGgtagtagcac ... ttttcggaagTTTGCTGCTAGAGGTTGCATATTTGGGGTTTCACACGTGCGCAATTTGAAG
EST: gi|209724648|gb|BW651433.1|BW651433
EST:     TTCATTTTCTCTCTCCCCCCGAACACTCAAGTTTTATCTCTCAGCCTCAG                         TTTGCTGCTAGAGGTTGCATATTTGGGGTTTCACACGTGCGCAATTTGAAG
genomic: TTCATTTTCTCTCTCCCCCCGAACACTCAAGTTTTATCTCTCAGCCTCAGgtagtagcac ... ttttcggaagTTTGCTGCTAGAGGTTGCATATTTGGGGTTTCACACGTGCGCAATTTGAAG
EST: gi|213599194|gb|DB962259.1|DB962259
EST:     TTCATTTTCTCTCTCCCCCCGAACACTCAAGTTTTATCTCTCAGCCTCAG                         TTTGCTGCTAGAGGTTGCATATTTGGGGTTTCACACGTGCGCAATTTGAAG
genomic: TTCATTTTCTCTCTCCCCCCGAACACTCAAGTTTTATCTCTCAGCCTCAGgtagtagcac ... ttttcggaagTTTGCTGCTAGAGGTTGCATATTTGGGGTTTCACACGTGCGCAATTTGAAG
EST: gi|209719983|gb|BW651078.1|BW651078
EST:     TTCATTTTCTCTCTCCCCCCGAACACTCAAGTTTTATCTCTCAGCCTCAG                         TTTGCTGCTAGAGGTTGCATATTTGGGGTTTCACACGTGCGC-------A-
genomic: TTCATTTTCTCTCTCCCCCCGAACACTCAAGTTTTATCTCTCAGCCTCAGgtagtagcac ... ttttcggaagTTTGCTGCTAGAGGTTGCATATTTGGGGTTTCACACGTGCGCAATTTGAAG