1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
ATGGACGGTGGTGGAGTGAACTACAACCCTCGCACCGTGGAACAGGTTTTCCGGGACTTCAAGGGCCGTAGAGCTGGCATGATCAAGGCTCTCACCACTGgtctctctctctctctctctcactcgcttttgttcttaccaattaatttcagtgtttcctctgcaaaattacctgttcctgtttttaatacattctaatactcaactttccttttcctttcttctcag
species | Glycine max |
transcript | GLYMA17G05940.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CCGGGACTTCAAGGGCCGTAGAGCTGGCATGATCAAGGCTCTCACCACTG ATGTTGAAGAATTTTTCCAGCAGTGCGATCCTGEST: gi|192312491|gb|FK003227.1|FK003227
genomic: CCGGGACTTCAAGGGCCGTAGAGCTGGCATGATCAAGGCTCTCACCACTGgtctctctct ... ttcttctcagATGTTGAAGAATTTTTCCAGCAGTGCGATCCTG
EST: CATGATCAAGGCTCTCACCACTG ATGTTGAAGAATTTTTCCAGCAGTGCGATCCTGEST: gi|193538719|gb|FK495981.1|FK495981
genomic: CATGATCAAGGCTCTCACCACTGgtctctctct ... ttcttctcagATGTTGAAGAATTTTTCCAGCAGTGCGATCCTG
EST: CCGGGACTTCAAGGGCCGTAGAGCTGGCATGATCAAGGCTCTCACCACTG ATGTTGAAGAATTTTTCCAGCAGTGCGATCCTGEST: gi|26048084|gb|CA784679.1|CA784679
genomic: CCGGGACTTCAAGGGCCGTAGAGCTGGCATGATCAAGGCTCTCACCACTGgtctctctct ... ttcttctcagATGTTGAAGAATTTTTCCAGCAGTGCGATCCTG
EST: CCGGGACTTCAAGGGCCGTAGAGCTGGCATGATCAAGGCTCTCACCACTG ATGTTGAAGAATTTTTCCAGCAGTGCGATCCTGEST: gi|26045766|gb|CA783254.1|CA783254
genomic: CCGGGACTTCAAGGGCCGTAGAGCTGGCATGATCAAGGCTCTCACCACTGgtctctctct ... ttcttctcagATGTTGAAGAATTTTTCCAGCAGTGCGATCCTG
EST: CCGGGACTTCAAGGGCCGTAGAGCTGGCATGATCAAGGCTCTCACCACTG ATGTTGAAGAATTTTTCCAGCAGTGCGATCCTGEST: gi|192312490|gb|FK003226.1|FK003226
genomic: CCGGGACTTCAAGGGCCGTAGAGCTGGCATGATCAAGGCTCTCACCACTGgtctctctct ... ttcttctcagATGTTGAAGAATTTTTCCAGCAGTGCGATCCTG
EST: CCGGGACTTCAAGGGCCGTAGAGCTGGCATGATCAAGGCTCTCACCACTG ATGTTGAAGAATTTTTCCAGCAGTGCGATCCTG
genomic: CCGGGACTTCAAGGGCCGTAGAGCTGGCATGATCAAGGCTCTCACCACTGgtctctctct ... ttcttctcagATGTTGAAGAATTTTTCCAGCAGTGCGATCCTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGGACGGTGGTGGAGTGAACTACAACCCTCGCACCGTGGAACAGGTTTTCCGGGACTTCAAGGGCCGTAGAGCTGGCATGATCAAGGCTCTCACCACTGgtctctctctctctctctctcactcgcttttgttcttaccaattaatttcagtgtttcctctgcaaaattacctgttcctgtttttaatacattctaatactcaactttccttttcctttcttctcag
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