1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CCACTTCAATTAGGTATATCGCCGATTCGATTACCAATTTGCTTAAACTCAATCAAGCTTCGCAGCGTCAATCATTCTATTAGAGGTGATCATAATCCATgtaattctcgtacttcatccctagttatattttgtatcaaaaccctaattttacatccttcacgcgcttaatccttgtattttctttgcgcgattggttt...
species | Glycine max |
transcript | GLYMA17G05010.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TCAAGCTTCGCAGCGTCAATCATTCTATTAGAGGTGATCATAATCCAT TTTCGGATTGCTATATTTAAGTAGTTGTAGTGTAGTTTGATTGGTAAATGGEST: gi|213592423|gb|DB971607.1|DB971607
genomic: TCAAGCTTCGCAGCGTCAATCATTCTATTAGAGGTGATCATAATCCATgtaattctcg ... tctattgcagTTTCGGATTGCTATATTTAAGTAGTTGTAGTGTAGTTTGATTGGTAAATGG
EST: AATCAAGCTTCGCAGCGTCAATCATTCTATTAGAGGTGATCATAATCCAT TTTCGGATTGCTATATTTAAGTAGTTGTAGTGTAGTTTGATTGGTAAATGGEST: gi|213590561|gb|DB968111.1|DB968111
genomic: AATCAAGCTTCGCAGCGTCAATCATTCTATTAGAGGTGATCATAATCCATgtaattctcg ... tctattgcagTTTCGGATTGCTATATTTAAGTAGTTGTAGTGTAGTTTGATTGGTAAATGG
EST: AATCAAGCTTCGCAGCGTCAATCATTCTATTAGAGGTGATCATAATCCAT TTTCGGATTGCTATATTTAAGTAGTTGTAGTGTAGTTTGATTGGTAAATGGEST: gi|209719189|gb|BW679768.1|BW679768
genomic: AATCAAGCTTCGCAGCGTCAATCATTCTATTAGAGGTGATCATAATCCATgtaattctcg ... tctattgcagTTTCGGATTGCTATATTTAAGTAGTTGTAGTGTAGTTTGATTGGTAAATGG
EST: AATCAAGCTTCGCAGCGTCAATCATTCTATTAGAGGTGATCATAATCCAT TTTCGGATTGCTATATTTAAGTAGTTGTAGTGTAGTTTGATTGGTAAATGG
genomic: AATCAAGCTTCGCAGCGTCAATCATTCTATTAGAGGTGATCATAATCCATgtaattctcg ... tctattgcagTTTCGGATTGCTATATTTAAGTAGTTGTAGTGTAGTTTGATTGGTAAATGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCACTTCAATTAGGTATATCGCCGATTCGATTACCAATTTGCTTAAACTCAATCAAGCTTCGCAGCGTCAATCATTCTATTAGAGGTGATCATAATCCATgtaattctcgtacttcatccctagttatattttgtatcaaaaccctaattttacatccttcacgcgcttaatccttgtattttctttgcgcgattggttt
- - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tccttcac