Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|254345963|gb|GR859610.1|GR859610EST: GGTTAGATAATGCTGGGAAGACCACTTTGCTTCACATGCTCAAAGACGAG AGACTGGTTCAGCATCAACCTACTCAATATCCCACTTCGGAGGAGTTGAGT
genomic: GGTTAGATAATGCTGGGAAGACCACTTTGCTTCACATGCTCAAAGACGAGgttttctttt ... aattttgcagAGACTGGTTCAGCATCAACCTACTCAATATCCCACTTCGGAGGAGTTGAGT
EST:
gi|254321825|gb|GR837239.1|GR837239EST: GGTTAGATAATGCTGGGAAGACCACTTTGCTTCACATGCTCAAAGACGAG AGACTGGTTCAGCATCAACCTACTCAATATCCCACTTCGGAGGAGTTGAGT
genomic: GGTTAGATAATGCTGGGAAGACCACTTTGCTTCACATGCTCAAAGACGAGgttttctttt ... aattttgcagAGACTGGTTCAGCATCAACCTACTCAATATCCCACTTCGGAGGAGTTGAGT
EST:
gi|254330493|gb|GR841758.1|GR841758EST: GGTTAGATAATGCTGGGAAGACCACTTTGCTTCACATGCTCAAAGACGAG AGACTGGTTCAGCATCAACCTACTCAATATCCCACTTCGGAGGAGTTGAGT
genomic: GGTTAGATAATGCTGGGAAGACCACTTTGCTTCACATGCTCAAAGACGAGgttttctttt ... aattttgcagAGACTGGTTCAGCATCAACCTACTCAATATCCCACTTCGGAGGAGTTGAGT
EST:
gi|254321826|gb|GR837240.1|GR837240EST: GGTTAGATAATGCTGGGAAGACCACTTTGCTTCACATGCTCAAAGACGAG AGACTGGTTCAGCATCAACCTACTCAATATCCCACTTCGGAGGAGTTGAGT
genomic: GGTTAGATAATGCTGGGAAGACCACTTTGCTTCACATGCTCAAAGACGAGgttttctttt ... aattttgcagAGACTGGTTCAGCATCAACCTACTCAATATCCCACTTCGGAGGAGTTGAGT
EST:
gi|298179842|gb|HO025057.1|HO025057EST: GGTTAGATAATGCTGGGAAGACCACTTTGCTTCACATGCTCAAAGACGAG AGACTGGTTCAGCATCAACCTACTCAATATCCCACTTCGGAGGAGTTGAGT
genomic: GGTTAGATAATGCTGGGAAGACCACTTTGCTTCACATGCTCAAAGACGAGgttttctttt ... aattttgcagAGACTGGTTCAGCATCAACCTACTCAATATCCCACTTCGGAGGAGTTGAGT
EST:
gi|151394675|gb|EV264546.1|EV264546EST: GGTTAGATAATGCTGGGAAGACCACTTTGCTTCACATGCTCAAAGACGAG AGACTGGTTCAGCATCAACCTACTCAATATCCCACTTCGGAGGAGTTGAGT
genomic: GGTTAGATAATGCTGGGAAGACCACTTTGCTTCACATGCTCAAAGACGAGgttttctttt ... aattttgcagAGACTGGTTCAGCATCAACCTACTCAATATCCCACTTCGGAGGAGTTGAGT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TTTGGCGACCCTTGGTCTGTGGCAAAAGGAGGCGAAGATTTTGTTCCTAGGGTTAGATAATGCTGGGAAGACCACTTTGCTTCACATGCTCAAAGACGAGgttttcttttttctttttttactttacttttgtgatatcttattattggattattgctcaaggatttttaattttacttatatttataactttttaaagtgaataattgaaattttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA