Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATCGCTTTGTTCGTGATTAACTGCCTGCCTGAAATGATGGGAATTGCCCAAATTGATGCATTATTTCTCTTCAGATTTTCCATTTCTCGATAACTCCATTgtcggttagcttcatactaatatatatgtttttctaatctttaagtatcctatttttagggttaggtattattttttttctttttctttctagaccgaat...

Basic information

species Glycine max
transcript GLYMA17G00740.2
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193700713|gb|FK635566.1|FK635566
EST:     AATTGATGCATTATTTCTCTTCAGATTTTCCATTTCTCGATAACTCCATT                         GTCGCAACATGGCTCAACAACAGGAGGACGAAATGGAGTATGTTGCTGATG
genomic: AATTGATGCATTATTTCTCTTCAGATTTTCCATTTCTCGATAACTCCATTgtcggttagc ... ttttatggagCA-GCAACATGGCTCAACAACAGGAGGACGAAATGGAGTATGTTGCTGATG
EST: gi|254340112|gb|GR858237.1|GR858237
EST:     AGATTTTCCATTTCTCGATAACTCCATTGT                        
genomic: AGATTTTCCATTTCTCGATAACTCCA-T-Tgtcggttagc ... ttttatgga
EST: gi|193650904|gb|FK598519.1|FK598519
EST:     ATTGATGCAATTATTTCTCTTCAGATTTTCCATTTCTCGATAACTCCATT                         CA--AACATGGCTCAACAACAGGAGGACGAAATGGAGTATGTTGCT
genomic: ATTGATGCA-TTATTTCTCTTCAGATTTTCCATTTCTCGATAACTCCATTgtcggttagc ... ttttatggagCAGCAACATGGCTCAACAACAGGAGGACGAAATGGAGTATGTTGCT
EST: gi|193578508|gb|FK534788.1|FK534788
EST:     AATTGATGCATTATTTCTCTTCAGATTTTCCATTTCTCGATAACTCCATT                         CA--A-CATGGCTCAACAACAGGAGGACGAAATGGAGTATGTTGCT
genomic: AATTGATGCATTATTTCTCTTCAGATTTTCCATTTCTCGATAACTCCATTgtcggttagc ... ttttatggagCAGCAACATGGCTCAACAACAGGAGGACGAAATGGAGTATGTTGCT