1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
AGGATTAGGGTTTGTGGAGATGCAAGGGCAAGGCGTTGATGAAGTGAGCATAGAAGAGTTGGCGTCGAATCTTTCCCTCTACAAAGATCAACTGAACCAGgtaaccaagctcgctcacaactattcactcattctttcttgtttgtttaataatgtttttttgaatccatcag
species | Glycine max |
transcript | GLYMA17G00560.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TAGGAGAGTTGGCGTCGAATCTTTCCCTCTACAAAGATCAACTGAACCAG GTTAGAGAACTCTTAAACGATGACCCTGCAAATTCTGAATATGTTGACATGEST: gi|151411149|gb|EV280960.1|EV280960
genomic: TAGAAGAGTTGGCGTCGAATCTTTCCCTCTACAAAGATCAACTGAACCAGgtaaccaagc ... aatccatcagGTTAGAGAACTCTTAAACGATGACCCTGCAAATTCTGAATATGTTGACATG
EST: TAGAAGAGTTGGCGTCGAATCTTTCCCCCTACAAAGATCAACTGAACCAG GTTAGAGAACTCTTAAACGATGACCCTGCAAATTCTGAATATGTTGACATGEST: gi|193654182|gb|FK597380.1|FK597380
genomic: TAGAAGAGTTGGCGTCGAATCTTTCCCTCTACAAAGATCAACTGAACCAGgtaaccaagc ... aatccatcagGTTAGAGAACTCTTAAACGATGACCCTGCAAATTCTGAATATGTTGACATG
EST: TAGAAGAGTTGGCGTCGAATCTTTCCCTCTACAAAGATCAACTGAACCAG GTTAGAGAACTCTTAAACGATGACCCTGCAAATTCTGAATATGTTGACATG
genomic: TAGAAGAGTTGGCGTCGAATCTTTCCCTCTACAAAGATCAACTGAACCAGgtaaccaagc ... aatccatcagGTTAGAGAACTCTTAAACGATGACCCTGCAAATTCTGAATATGTTGACATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGGATTAGGGTTTGTGGAGATGCAAGGGCAAGGCGTTGATGAAGTGAGCATAGAAGAGTTGGCGTCGAATCTTTCCCTCTACAAAGATCAACTGAACCAGgtaaccaagctcgctcacaactattcactcattctttcttgtttgtttaataatgtttttttgaatccatcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGATCA