1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
GATTATTCTTCTTCTGTGCCCTAGCGCCTTTTCCTCCGCCGTCAACCACCGTATCCCTCCCGCTTCCGGCACCGATCGAACAGTCTCCGGCCAAGTTCAGgtaattcgcattcttctctctgaaccactgctgcttgaggcgccatttactgcatcgcctccctcgcagcgtgctttagggttttgcttttggactcgtc...
species | Glycine max |
transcript | GLYMA16G33380.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GTATCCCTCCCGCTTCCGGCACCGATCGAACAGTCTCCGGCCAAGTTCAG TTCTTGCTTGCGAAAATTCTCGGAATATTTTGAATCCAGGAAATCATGCACEST: gi|16278542|gb|BI942959.1|BI942959
genomic: GTATCCCTCCCGCTTCCGGCACCGATCGAACAGTCTCCGGCCAAGTTCAGgtaattcgca ... ctggatttagTTCTTGCTTGCGAAAATTCTCGGAATATTTTGAATCCAGGAAATCATGCAC
EST: GTATCCCTCCCGCTTCCGGCACCGATCGAACAGTCTCCGGCCAAGTTCAG TTCTTGCTTGCGAAAATTCTCGGAATATTTTGAATCCAGGAAATCATGCACEST: gi|24206236|gb|BU965489.1|BU965489
genomic: GTATCCCTCCCGCTTCCGGCACCGATCGAACAGTCTCCGGCCAAGTTCAGgtaattcgca ... ctggatttagTTCTTGCTTGCGAAAATTCTCGGAATATTTTGAATCCAGGAAATCATGCAC
EST: GTATCCCTCCCGCTTCCGGCACCGATCGAACAGTCTCCGGCCAAGTTCAG TTCTTGCTTGCGAAAATTCTCGGAATATTTTGAATCCAGGAAATCATGCACEST: gi|162286128|gb|FC456630.1|FC456630
genomic: GTATCCCTCCCGCTTCCGGCACCGATCGAACAGTCTCCGGCCAAGTTCAGgtaattcgca ... ctggatttagTTCTTGCTTGCGAAAATTCTCGGAATATTTTGAATCCAGGAAATCATGCAC
EST: GTATCCCTCCCGCTTCCGGCACCGATCGAACAGTCTCCGGCCAAGTTCAG TTCTTGCTTGCGAAAATTCTCGGAATATTTTGAATCCAGGAAATCATGCAC
genomic: GTATCCCTCCCGCTTCCGGCACCGATCGAACAGTCTCCGGCCAAGTTCAGgtaattcgca ... ctggatttagTTCTTGCTTGCGAAAATTCTCGGAATATTTTGAATCCAGGAAATCATGCAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATTATTCTTCTTCTGTGCCCTAGCGCCTTTTCCTCCGCCGTCAACCACCGTATCCCTCCCGCTTCCGGCACCGATCGAACAGTCTCCGGCCAAGTTCAGgtaattcgcattcttctctctgaaccactgctgcttgaggcgccatttactgcatcgcctccctcgcagcgtgctttagggttttgcttttggactcgtc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctccctc