Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|22927619|gb|BU544758.1|BU544758EST: CCCAATTCATTTGTACATATCTGTAATAAGNCTCCTTCTCATCTTTGAAG GTATTCCACGGGCTATTTGTATGGAACAGAATCCAGCTTGTGTTATATCGT
genomic: CCCAATTCATTTGTACATATCTGTAATAAGCCTCCTTCTCATCTTTGAAGgtgctcatca ... tctctactagGTATTCCACTGGCTATTTGTATGGAACAGAATCCAGCTTGTGTTATATCGT
EST:
gi|6454486|gb|AW185169.1|AW185169EST: CCCAATTCATTTGTACATATCTGTAATAAGCCTCCTTCTCATCTTTGAAG GTATTCCACTGGCTATTTGTATGGAACAGAATCCAGCTTGTGTTATATCGT
genomic: CCCAATTCATTTGTACATATCTGTAATAAGCCTCCTTCTCATCTTTGAAGgtgctcatca ... tctctactagGTATTCCACTGGCTATTTGTATGGAACAGAATCCAGCTTGTGTTATATCGT
EST:
gi|151393326|gb|EV263201.1|EV263201EST: CCCAATTCATTTGTACATATCTGTAATAAGCCTCCTTCTCATCTTTGAAG GTATTCCACTGGCTATTTGTATGGAACAGAATCCAGCTTGTGTTATATCGT
genomic: CCCAATTCATTTGTACATATCTGTAATAAGCCTCCTTCTCATCTTTGAAGgtgctcatca ... tctctactagGTATTCCACTGGCTATTTGTATGGAACAGAATCCAGCTTGTGTTATATCGT
EST:
gi|151395553|gb|EV265430.1|EV265430EST: CCCAATTCATTTGTACATATCTGTAATAAGCCTCCTTCTCATCTTTGAAG GTATTCCACTGGCTATTTGTATGGAACAGAATCCAGCTTGTGTTATATCGT
genomic: CCCAATTCATTTGTACATATCTGTAATAAGCCTCCTTCTCATCTTTGAAGgtgctcatca ... tctctactagGTATTCCACTGGCTATTTGTATGGAACAGAATCCAGCTTGTGTTATATCGT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
ACTTACCCAAATACTATTTTGCAATATTTTCCAAACGACAACTTTGGCCTCCCAATTCATTTGTACATATCTGTAATAAGCCTCCTTCTCATCTTTGAAGgtgctcatcaataatttaactatgcatgctatatgttttactttgtcacaaattataattattctattaagtatgttaagccctttgtatattgatctctactag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG