1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CCACACTTCACACATTCGACGAAGAATTGGCGACCGGCGAGAGAGTTAATGGGAGGAAGAATAACGCTTGAAAGGTTCTGAGgtaaggcttttaaaccaccaaggttttgattattataaatttcgttttcttcgcaacccatgactaactggaactatgaaacggtagtggctttttgcaa...
species | Glycine max |
transcript | GLYMA16G33060.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ACCGGCGAGAGAGTTAATGGGAGGAAGAATAACGCTTGAAAGGTTCTGAG TGAGCTACAGGAACATAGAACAAACATACATGGGGCTGCCGCTACTTTCTTEST: gi|213608138|gb|DB963040.1|DB963040
genomic: ACCGGCGAGAGAGTTAATGGGAGGAAGAATAACGCTTGAAAGGTTCTGAGgtaaggcttt ... ttctttgcagTGAGCTACAGGAACATAGAACAAACATACATGGGGCTGCCGCTACTTTCTT
EST: ACCGGCGAGAGAGTTAATGGGAGGAAGAATAACGCTTGAAAGGTTCTGAG TGAGCTACAGGAACATAGAACAAACATACATGGGGCTGCCGCTACTTTCTT
genomic: ACCGGCGAGAGAGTTAATGGGAGGAAGAATAACGCTTGAAAGGTTCTGAGgtaaggcttt ... ttctttgcagTGAGCTACAGGAACATAGAACAAACATACATGGGGCTGCCGCTACTTTCTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCACACTTCACACATTCGACGAAGAATTGGCGACCGGCGAGAGAGTTAATGGGAGGAAGAATAACGCTTGAAAGGTTCTGAGgtaaggcttttaaaccaccaaggttttgattattataaatttcgttttcttcgcaacccatgactaactggaactatgaaacggtagtggctttttgcaa
- - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccaccaa