1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CGGCTTCCACTTTTTCAACCCTCTCGCCGGCGAATGCCTCTCCGGTATCCTCTCCACCAGGATCTCCTCCCTCGATGTCCGCATCGAAACCAAAACCAAGgtatttcaattctcaatttctttattctttttattttgtcacattctgttcttaatcataatttgtcaggttcttaataatcgatgatggtgatggtcatggagaaaagaatagcagtgagtgatttttttaaatcttgaattgttttgcag
species | Glycine max |
transcript | GLYMA16G32990.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TCTCCACCAGGATCTCCTCCCTCGATGTCCGCATCGAAACCAAAACCAAG GACAATGTGTTTGTGCTGTTGCTGTGTTCGATTCAATACCGAGTGATTAAGEST: gi|254327495|gb|GR837050.1|GR837050
genomic: TCTCCACCAGGATCTCCTCCCTCGATGTCCGCATCGAAACCAAAACCAAGgtatttcaat ... tgttttgcagGACAATGTGTTTGTGCAGTTGCTGTGTTCGATTCAATACCGAGTGATTAAG
EST: TCTCCACCAGGATCTCCTCCCTCGATGTCCGCATCGAAACCAAAACCAAG GACAATGTGTTTGTGCAGTTGCTGTGTTCGATTCAATACCGAGTGATTAAGEST: gi|213603197|gb|DB960460.1|DB960460
genomic: TCTCCACCAGGATCTCCTCCCTCGATGTCCGCATCGAAACCAAAACCAAGgtatttcaat ... tgttttgcagGACAATGTGTTTGTGCAGTTGCTGTGTTCGATTCAATACCGAGTGATTAAG
EST: TCTCCACCAGGATCTCCTCCCTCGATGTCCGCATCGAAACCAAAACCAAG GACAATGTGTTTGTGCAGTTGCTGTGTTCGATTCAATACCGAGTGATTAAGEST: gi|254346709|gb|GR856431.1|GR856431
genomic: TCTCCACCAGGATCTCCTCCCTCGATGTCCGCATCGAAACCAAAACCAAGgtatttcaat ... tgttttgcagGACAATGTGTTTGTGCAGTTGCTGTGTTCGATTCAATACCGAGTGATTAAG
EST: TCTCCACCAGGATCTCCTCCCTCGATGTCCGCATCGAAACCAAAACCAAG GACAATGTGTTTGTGCAGTTGCTGTGTTCGATTCAATACCGAGTGATTAAGEST: gi|192328203|gb|FK022882.1|FK022882
genomic: TCTCCACCAGGATCTCCTCCCTCGATGTCCGCATCGAAACCAAAACCAAGgtatttcaat ... tgttttgcagGACAATGTGTTTGTGCAGTTGCTGTGTTCGATTCAATACCGAGTGATTAAG
EST: TCTCCACCAGGATCTCCTCCCTCGATGTCCGCATCGAAACCAAAACCAAG GACAATGTGTTTGTGCAGTTGCTGTGTTCGATTCAATACCGAGTGATTAAGEST: gi|298179574|gb|HO028045.1|HO028045
genomic: TCTCCACCAGGATCTCCTCCCTCGATGTCCGCATCGAAACCAAAACCAAGgtatttcaat ... tgttttgcagGACAATGTGTTTGTGCAGTTGCTGTGTTCGATTCAATACCGAGTGATTAAG
EST: TCTCCACCAGGATCTCCTCCCTCGATGTCCGCATCGAAACCAAAACCAAG GACAATGTGTTTGTGCAGTTGCTGTGTTCGATTCAATACCGAGTGATTAAGEST: gi|209701321|gb|BW655916.1|BW655916
genomic: TCTCCACCAGGATCTCCTCCCTCGATGTCCGCATCGAAACCAAAACCAAGgtatttcaat ... tgttttgcagGACAATGTGTTTGTGCAGTTGCTGTGTTCGATTCAATACCGAGTGATTAAG
EST: TCTCCACCAGGATCTCCTCCCTCGATGTCCGCATCGAAACCAAAACCAAG GACAATGTGTTTGTGCAGTTGCTGTGTTCGATTCAATACCGAGTGATTAAGEST: gi|298184948|gb|HO030161.1|HO030161
genomic: TCTCCACCAGGATCTCCTCCCTCGATGTCCGCATCGAAACCAAAACCAAGgtatttcaat ... tgttttgcagGACAATGTGTTTGTGCAGTTGCTGTGTTCGATTCAATACCGAGTGATTAAG
EST: TCTCCACCAGGATCTCCTCCCTCGATGTCCGCATCGAAACCAAAACCCAG GACAATGTGTTTGTGCAGTTGCTGTGTTCGATTCAATACCGAGTGATTAAGEST: gi|298164789|gb|HO010786.1|HO010786
genomic: TCTCCACCAGGATCTCCTCCCTCGATGTCCGCATCGAAACCAAAACCAAGgtatttcaat ... tgttttgcagGACAATGTGTTTGTGCAGTTGCTGTGTTCGATTCAATACCGAGTGATTAAG
EST: TCTCCACCAGGATCTCCTCCCTCGATGTCCGCATCGAAACCAAAACCAAG GACAATGTGTTTGTGCAGTTGCGGTGTTCGATTCAATACCGAGTGATTAAGEST: gi|16347781|gb|BI973376.1|BI973376
genomic: TCTCCACCAGGATCTCCTCCCTCGATGTCCGCATCGAAACCAAAACCAAGgtatttcaat ... tgttttgcagGACAATGTGTTTGTGCAGTTGCTGTGTTCGATTCAATACCGAGTGATTAAG
EST: TCTCCTTTATGATCTCCTCCCTCGATGTCCGCATCGAAACCAAAACCAAG GACAATGTGTTTGTGCAGTTGCTGTGTTCGATTCAATACCGAGTGATTAAGEST: gi|298197264|gb|HO042007.1|HO042007
genomic: TCTCCACCAGGATCTCCTCCCTCGATGTCCGCATCGAAACCAAAACCAAGgtatttcaat ... tgttttgcagGACAATGTGTTTGTGCAGTTGCTGTGTTCGATTCAATACCGAGTGATTAAG
EST: TCTCCACCAGGATCTCCTCCCTCGATGTCCGCATCGAAACCAAAACCAAG GACAATGTGTTTGTGCAGTTGCTGTGTTCGATTCAATACCGAGTGATTAAGEST: gi|193325061|gb|FK290597.1|FK290597
genomic: TCTCCACCAGGATCTCCTCCCTCGATGTCCGCATCGAAACCAAAACCAAGgtatttcaat ... tgttttgcagGACAATGTGTTTGTGCAGTTGCTGTGTTCGATTCAATACCGAGTGATTAAG
EST: CTCCACCAGGATCTCCTCCCTCGATGTCCGCATCGAAACCTAAAACCAAG GACAATGTGTTTGTGCAGTTGCTGTGTTCGATTCAATACCGAGTGATTAAEST: gi|120530546|gb|EH258679.1|EH258679
genomic: CTCCACCAGGATCTCCTCCCTCGATGTCCGCATCGAAACC-AAAACCAAGgtatttcaat ... tgttttgcagGACAATGTGTTTGTGCAGTTGCTGTGTTCGATTCAATACCGAGTGATTAA
EST: TCTCCACCAGGATCTCCTCCCTCGATGTCCGCATCGAAACCAAAACCAAG GACAATGTGTTTGTGCAGTTGCTGTGTTCGATTCAATACCGAGTGATTAAG
genomic: TCTCCACCAGGATCTCCTCCCTCGATGTCCGCATCGAAACCAAAACCAAGgtatttcaat ... tgttttgcagGACAATGTGTTTGTGCAGTTGCTGTGTTCGATTCAATACCGAGTGATTAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGGCTTCCACTTTTTCAACCCTCTCGCCGGCGAATGCCTCTCCGGTATCCTCTCCACCAGGATCTCCTCCCTCGATGTCCGCATCGAAACCAAAACCAAGgtatttcaattctcaatttctttattctttttattttgtcacattctgttcttaatcataatttgtcaggttcttaataatcgatgatggtgatggtcatggagaaaagaatagcagtgagtgatttttttaaatcttgaattgttttgcag
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