Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|58014775|gb|CX701517.1|CX701517EST: CTTCTGTGCAACCTCATGCAGCTGAATCTTTCTCTGTTGGATATATTCAG ATGAAGACTGCAGCGAACTGTTCTTACCTGGTAGTTATATCTACGAGTTGT
genomic: CTTCTGTGCAACCTCATGCAGCTGAATCTTTCTCTGTTGGATATATTCAGgtactaaaat ... tgtttaaaagATGAAGACTGCAGCGAACTGTTCTTACCTGGTAGTTATATCTACGAGTTGT
EST:
gi|193346664|gb|FK312130.1|FK312130EST: TTCTGTGCAACCTCATGCAGCTGAATCTTTCTCTGTTGGATATATTCAG ATGAAGACTGCAGCGAA
genomic: TTCTGTGCAACCTCATGCAGCTGAATCTTTCTCTGTTGGATATATTCAGgtactaaaat ... tgtttaaaagATGAAGACTGCAGCGAA
EST:
gi|192295066|gb|FG986785.1|FG986785EST: CTTCTGTGCAACCTCATGCAGCTGAATCTTTCTCTGTTGGATATATTCAG ATGAAGACTGCAGCGAACTGTTCTTACCTGGTAGTTATATCTACGAGTTGT
genomic: CTTCTGTGCAACCTCATGCAGCTGAATCTTTCTCTGTTGGATATATTCAGgtactaaaat ... tgtttaaaagATGAAGACTGCAGCGAACTGTTCTTACCTGGTAGTTATATCTACGAGTTGT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GTTCTGCTTTGCCTCTGCACTGACCCTTTCAGTATCGGAGTCCAAATCTGCTTCTGTGCAACCTCATGCAGCTGAATCTTTCTCTGTTGGATATATTCAGgtactaaaattctgatttttttagaaaaaaataaattatacccttttttttctattttattttgttgttgttttatatatgcataatatgaaggctaaataatgttttattatttgtgtgtttaaaag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA