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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTTATCGTCTGGAACCCTACCGTTTTCGCCAGAGACTTGCTTCCTAAATTTTTCAAACACAATAATTTCTCTAGCTTCGTTCGCCAACTCAACACTTACgtaattatttcaattcaactctttgttttgtttttttttttttttttttgcttaggtttcgatgattttgaattttatttctaaaatttgtttataattttgcttgatttgcag

Basic information

species Glycine max
transcript GLYMA16G32070.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|9258663|gb|BE346810.1|BE346810
EST:     TTTTCAAACACAATAATTTCTCTAGCTTCGTTCGCCAACTCAACACTTAC                         GGATTCAGGAAAGTTGTGCCTGATCGGTGGGAGTTCTCGAACGATTATTTC
genomic: TTTTCAAACACAATAATTTCTCTAGCTTCGTTCGCCAACTCAACACTTACgtaattattt ... tgatttgcagGGATTCAGGAAAGTTGTGCCTGATCGGTGGGAGTTCTCGAACGATTATTTC
EST: gi|20075388|gb|BQ094171.1|BQ094171
EST:     TTTTCAAACACAATAATTTCTCTAGCTTCGTTCGCCAACTCAACACTTAC                         GGATTCAGGAAAGTTGTGCCTGATCGGTGGGAGTTCTCGAACGATTATTTC
genomic: TTTTCAAACACAATAATTTCTCTAGCTTCGTTCGCCAACTCAACACTTACgtaattattt ... tgatttgcagGGATTCAGGAAAGTTGTGCCTGATCGGTGGGAGTTCTCGAACGATTATTTC
EST: gi|10844748|gb|BF067962.1|BF067962
EST:     TTTTCAAACACAATAATTTCTCTAGCTTCGTTCGCCAACTCAACACTTAC                         GGATTCAAGAAAGTTGTGCCTGATCTGTGG
genomic: TTTTCAAACACAATAATTTCTCTAGCTTCGTTCGCCAACTCAACACTTACgtaattattt ... tgatttgcagGGATTCAGGAAAGTTGTGCCTGATCGGTGG
EST: gi|27424584|gb|CA936104.1|CA936104
EST:     TTTTCAAACACAATAATTTCTCTAGCTTCGTTCGCCAACTCAACACTTAC                         GGATTCAGGAAAGTTGTGCCTGATCGGTGGGAGTTCTCGAACGATTATTTC
genomic: TTTTCAAACACAATAATTTCTCTAGCTTCGTTCGCCAACTCAACACTTACgtaattattt ... tgatttgcagGGATTCAGGAAAGTTGTGCCTGATCGGTGGGAGTTCTCGAACGATTATTTC