Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|24135669|gb|BU926179.1|BU926179EST: GTGGTATCTTGAATTTGGAAGGCATGCATAGGCCTTTGCTGGCTGTTCAG TTAACGAAGCTCAAAGATGGGCTTGCAATGGGCCTAGCATTCAACCATGCT
genomic: GTGGTATCTTGAATTTGGAAGGCATGCATAGGCCTTTGCTGGCTGTTCAGgtaatataat ... ttgctcgcagTTAACGAAGCTCAAAGATGGGCTTGCAATGGGCCTAGCATTCAACCATGCT
EST:
gi|298192747|gb|HO033181.1|HO033181EST: GTGGTATCTTGAATTTGGAAGGCATGCATAGGCCTTTGCTGGCTGTTCAG TTAACGAAGCTC
genomic: GTGGTATCTTGAATTTGGAAGGCATGCATAGGCCTTTGCTGGCTGTTCAGgtaatataat ... ttgctcgcagTTAACGAAGCTC
EST:
gi|26058947|gb|CA801861.1|CA801861EST: GTGGCATCTTGAATTTGGAAGGCATGCATAGGCCTTTGCTGGCTGTTCAG TTAACGAAGCTCCAAGATGGGCTTGCAATGGGCCTAGCATTCAACCATGCT
genomic: GTGGTATCTTGAATTTGGAAGGCATGCATAGGCCTTTGCTGGCTGTTCAGgtaatataat ... ttgctcgcagTTAACGAAGCTCAAAGATGGGCTTGCAATGGGCCTAGCATTCAACCATGCT
EST:
gi|10235220|gb|BE804167.1|BE804167EST: GTGGTATCTTGAATTTGGAAGGCATGCATAGGCCTTTGCTGGCTGTTCAG TTAACGAAGCTCAAAGATGGGCTTGCAATGGGCCTAGCATTCAACCATGCT
genomic: GTGGTATCTTGAATTTGGAAGGCATGCATAGGCCTTTGCTGGCTGTTCAGgtaatataat ... ttgctcgcagTTAACGAAGCTCAAAGATGGGCTTGCAATGGGCCTAGCATTCAACCATGCT
EST:
gi|18692765|gb|BM521613.1|BM521613EST: GTGGTATCTTGAATTTGGAAGGCATGCATAGGCCTTTGCTGGCTGTTCAG TTAACGAAGCTCAAAGATGGGCTTGCAATGGGCCTAGCATTCAACCATGCT
genomic: GTGGTATCTTGAATTTGGAAGGCATGCATAGGCCTTTGCTGGCTGTTCAGgtaatataat ... ttgctcgcagTTAACGAAGCTCAAAGATGGGCTTGCAATGGGCCTAGCATTCAACCATGCT
EST:
gi|26058667|gb|CA801581.1|CA801581EST: GTGGTATCTTGAATTTGGAAGGCATGCATAGGCCTTTGCTGGCTGTTCAG TTAACGAAGCTCAAAGATGGGCTTGCAATGGGCCTAGCATTCAACCATGCT
genomic: GTGGTATCTTGAATTTGGAAGGCATGCATAGGCCTTTGCTGGCTGTTCAGgtaatataat ... ttgctcgcagTTAACGAAGCTCAAAGATGGGCTTGCAATGGGCCTAGCATTCAACCATGCT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AACTGTGGCTGAAATTAGTAACACTAATTTGAAGGAGCTGATACCTTATAGTGGTATCTTGAATTTGGAAGGCATGCATAGGCCTTTGCTGGCTGTTCAGgtaatataatatgtagtttgttcaaatttccatgcatgctgatttaattagtttttatgttcttgattagattagccttttaaatactggaagtcatcat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT