Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|6914847|gb|AW396377.1|AW396377EST: CCAAACAATTCTTGCTTAGCTCTCACAAGCAAGCATTATCAACAATGAAG AAAATTGTGTTAAAGGTGGACTTACATGATGACAGGATCAAGCGAAAAGCT
genomic: CCAAACAATTCTTGCTTAGCTCTCACAAGCAAGCATTATCAACAATGAAGgtcagaacta ... tgtgtaacagAAAATTGTGTTAAAGGTGGACTTACATGATGACAGGATCAAGCGAAAAGCT
EST:
gi|10252828|gb|BE820594.1|BE820594EST: CCANNNAATTCTTGCTTAGCTCTCACANGCAAGCATTATCAACAATGAAG AAAATTGTGTTAAAGGTGGACTTACATGATGACAGGATCAAGCGAAAAGCT
genomic: CCAAACAATTCTTGCTTAGCTCTCACAAGCAAGCATTATCAACAATGAAGgtcagaacta ... tgtgtaacagAAAATTGTGTTAAAGGTGGACTTACATGATGACAGGATCAAGCGAAAAGCT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CAAAAGCCATAGTTTGTTACTTCTCTTCGCCTTTTGCTTTGCAATTGTCACCAAACAATTCTTGCTTAGCTCTCACAAGCAAGCATTATCAACAATGAAGgtcagaactagactcatattttcctctccttcccctaagcaatgcatgaatcacattcttgagttttctgagctttgtattaactgttttctttcatgttttagatgtagaagcaattaattattggatcttaacagctcttcgatatttgttgtgtaacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG