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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTGAAGCTGAACCCTAACTAGCTGAGCAGACGGAGGAGAACTCGACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTgtaagttcatcgtttcacactttacacaaataccctattcttcgcatacttcgtcgctgcaaccccgaacaacgataacctaatcaatttggcttcgccc...

Basic information

species Glycine max
transcript GLYMA16G27430.2
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|213619568|gb|DB963734.1|DB963734
EST:     GCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCCGT
genomic: GCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC--T
EST: gi|298193921|gb|HO040569.1|HO040569
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|298193921|gb|HO040569.1|HO040569
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|298193921|gb|HO040569.1|HO040569
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|298193921|gb|HO040569.1|HO040569
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|298193921|gb|HO040569.1|HO040569
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|298192839|gb|HO033273.1|HO033273
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|298192839|gb|HO033273.1|HO033273
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|298192839|gb|HO033273.1|HO033273
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|298192839|gb|HO033273.1|HO033273
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|298192839|gb|HO033273.1|HO033273
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|192332213|gb|FK023862.1|FK023862
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCT                         TCATGGTGCAAGAAAATGGCAAGAGGAAGAAACCAAACATTCTGGTGACTG
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTgtaagttcat ... taggttgcagTCATGGTGCAAGAAAATGGCAAGAGGAAGAAACCAAACATTCTGGTGACTG
EST: gi|298183620|gb|HO028833.1|HO028833
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|298183620|gb|HO028833.1|HO028833
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|298183620|gb|HO028833.1|HO028833
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|298183620|gb|HO028833.1|HO028833
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|298183620|gb|HO028833.1|HO028833
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|298173803|gb|HO017139.1|HO017139
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|298173803|gb|HO017139.1|HO017139
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|298173803|gb|HO017139.1|HO017139
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|298173803|gb|HO017139.1|HO017139
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|298173803|gb|HO017139.1|HO017139
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|254317987|gb|GR832155.1|GR832155
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|254317987|gb|GR832155.1|GR832155
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|254317987|gb|GR832155.1|GR832155
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|254317987|gb|GR832155.1|GR832155
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|254317987|gb|GR832155.1|GR832155
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|298196424|gb|HO041167.1|HO041167
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|298196424|gb|HO041167.1|HO041167
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|298196424|gb|HO041167.1|HO041167
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|298196424|gb|HO041167.1|HO041167
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|298196424|gb|HO041167.1|HO041167
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|192311583|gb|FK004838.1|FK004838
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|192311583|gb|FK004838.1|FK004838
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|192311583|gb|FK004838.1|FK004838
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|192311583|gb|FK004838.1|FK004838
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|192311583|gb|FK004838.1|FK004838
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|192316022|gb|FK007125.1|FK007125
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|192316022|gb|FK007125.1|FK007125
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|192316022|gb|FK007125.1|FK007125
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|192316022|gb|FK007125.1|FK007125
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|192316022|gb|FK007125.1|FK007125
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|192317805|gb|FK009397.1|FK009397
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|192317805|gb|FK009397.1|FK009397
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|192317805|gb|FK009397.1|FK009397
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|192317805|gb|FK009397.1|FK009397
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|192317805|gb|FK009397.1|FK009397
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|298193545|gb|HO034151.1|HO034151
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTTGT                     
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC-----Tgtaagttcat ... taggtt
EST: gi|298193545|gb|HO034151.1|HO034151
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTTGT                     
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC-----Tgtaagttcat ... taggtt
EST: gi|298193545|gb|HO034151.1|HO034151
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTTGT                     
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC-----Tgtaagttcat ... taggtt
EST: gi|151401187|gb|EV271001.1|EV271001
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|151401187|gb|EV271001.1|EV271001
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|151401187|gb|EV271001.1|EV271001
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|151401187|gb|EV271001.1|EV271001
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|151401187|gb|EV271001.1|EV271001
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|298178466|gb|HO024201.1|HO024201
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|298178466|gb|HO024201.1|HO024201
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|298178466|gb|HO024201.1|HO024201
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|298178466|gb|HO024201.1|HO024201
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|298178466|gb|HO024201.1|HO024201
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|254317988|gb|GR832156.1|GR832156
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAG-CTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|254317988|gb|GR832156.1|GR832156
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAG-CTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|254317988|gb|GR832156.1|GR832156
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAG-CTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|254317988|gb|GR832156.1|GR832156
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAG-CTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc
EST: gi|254317988|gb|GR832156.1|GR832156
EST:     GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAG-CTCAGACATTTCTGTT                       
genomic: GACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTC---Tgtaagttcat ... taggttgc

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CTGAAGCTGAACCCTAACTAGCTGAGCAGACGGAGGAGAACTCGACTGAAGCTGCCTCTGCGACGCCGTTTCGATTCAGCCTCAGACATTTCTgtaagttcatcgtttcacactttacacaaataccctattcttcgcatacttcgtcgctgcaaccccgaacaacgataacctaatcaatttggcttcgccc

- - - - - - - - - - - - - - - - - - - - - -  CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - -  AGCTGC