1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
GGTGGAAATGGGAGCGAGTCGAAAACTCCAAGGCGAGATTGATCGCGTTCTTAAGAAGGTTCAGGAAGGCGTCGAAGTCTTCGATAGCATCTGGAACAAGgtaggtcctcttctcttcttcgattatttcgaattttctcctgtttttggctcacacatggcgttggtgcgttag
species | Glycine max |
transcript | GLYMA16G26850.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TTAAGAAGGTTCAGGAAGGCGTCGAAGTCTTCGATAGCATCTGGAACAAG GTTTACGACACCGATAATGCGAACCAGAAGGAGAAGTTCGAGGCGGACCTGEST: gi|213615319|gb|DB963513.1|DB963513
genomic: TTAAGAAGGTTCAGGAAGGCGTCGAAGTCTTCGATAGCATCTGGAACAAGgtaggtcctc ... ggtgcgttagGTTTACGACACCGATAATGCGAACCAGAAGGAGAAGTTCGAGGCGGACCTG
EST: TTAAGAAGGTTCAGGAAGGCGTCGAAGTCTTCGATAGCATCTGGAACAAG GTTTACGACACCGATAATGCGAACCAGAAGGAGAAGTTCGAGGCGGACCTGEST: gi|213616529|gb|DB967179.1|DB967179
genomic: TTAAGAAGGTTCAGGAAGGCGTCGAAGTCTTCGATAGCATCTGGAACAAGgtaggtcctc ... ggtgcgttagGTTTACGACACCGATAATGCGAACCAGAAGGAGAAGTTCGAGGCGGACCTG
EST: TTAAGAAGGTTCAGGAAGGCGTCGAAGTCTTCGATAGCATCTGGAACAAG GTTTACGACACCGATAATGCGAACCAGAAGGAGAAGTTCGAGGCGGACCTGEST: gi|193359961|gb|FK327167.1|FK327167
genomic: TTAAGAAGGTTCAGGAAGGCGTCGAAGTCTTCGATAGCATCTGGAACAAGgtaggtcctc ... ggtgcgttagGTTTACGACACCGATAATGCGAACCAGAAGGAGAAGTTCGAGGCGGACCTG
EST: TTAAGAAGGTTCAGGAAGGCGTCGAAGTCTTCGATAGCATCTGGAACAAG GTTTACGACACCGATEST: gi|208181335|gb|GD978046.1|GD978046
genomic: TTAAGAAGGTTCAGGAAGGCGTCGAAGTCTTCGATAGCATCTGGAACAAGgtaggtcctc ... ggtgcgttagGTTTACGACACCGAT
EST: TTAAGAAGGTTCAGGAAGGCGTCGAAGTCTTCGATAGCATCTGGAACAAG GTTTACGACACCGATAATGCGAACCAGAAGGEST: gi|208191641|gb|GD991477.1|GD991477
genomic: TTAAGAAGGTTCAGGAAGGCGTCGAAGTCTTCGATAGCATCTGGAACAAGgtaggtcctc ... ggtgcgttagGTTTACGACACCGATAATGCGAACCAGAAGG
EST: AAGGTTCAGGAAGGCGTCGAAGTCTTCGATAGCATCTGGAACAAG GTTTACGACACCGATAATGCCAACCAGAAGGAGAAGTTCGAGGCTGACCTGEST: gi|207755154|gb|GD728853.1|GD728853
genomic: AAGGTTCAGGAAGGCGTCGAAGTCTTCGATAGCATCTGGAACAAGgtaggtcctc ... ggtgcgttagGTTTACGACACCGATAATGCGAACCAGAAGGAGAAGTTCGAGGCGGACCTG
EST: TTAAGAAGGTTCAGGAAGGCGTCGAAGTCTTCGATAGCATCTGGAACAAG GTTTACGACACCGATAATGCGAACCAGAAGGAGAAGEST: gi|208130258|gb|GD926757.1|GD926757
genomic: TTAAGAAGGTTCAGGAAGGCGTCGAAGTCTTCGATAGCATCTGGAACAAGgtaggtcctc ... ggtgcgttagGTTTACGACACCGATAATGCGAACCAGAAGGAGAAG
EST: TTAAGAAGGTTCAGGAAGGCGTCGAAGTCTTCGATAGCATCTGGAACAAG GTTTACGACACCGATAATGCGAACCAGAAGG
genomic: TTAAGAAGGTTCAGGAAGGCGTCGAAGTCTTCGATAGCATCTGGAACAAGgtaggtcctc ... ggtgcgttagGTTTACGACACCGATAATGCGAACCAGAAGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTGGAAATGGGAGCGAGTCGAAAACTCCAAGGCGAGATTGATCGCGTTCTTAAGAAGGTTCAGGAAGGCGTCGAAGTCTTCGATAGCATCTGGAACAAGgtaggtcctcttctcttcttcgattatttcgaattttctcctgtttttggctcacacatggcgttggtgcgttag
- - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG