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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGCACAAGGCAAGCAGAACAAGCTGGCATTAATATCAATGAGGCTCAGCAATTGCCTGGTAGATGTGGCCAACATGTCAATCCATTGTCCTGCCTCACAAgtatgttttccttctaatacttttgtatacattgagaaatgttaacaatacatttttaacacaatcttttaaataaattcgatattatctgttggtatct...

Basic information

species Glycine max
transcript GLYMA16G26480.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|51344762|gb|CO985495.1|CO985495
EST:     ATTGCCTGGTAGATGTGGCCAACATGTCAATCCATTGTCCTGCCTCACAA                         ATTCACCTGGTCCGACGAACTCAGATAGAAACTCAGCAACAAAATTGGTGC
genomic: ATTGCCTGGTAGATGTGGCCAACATGTCAATCCATTGTCCTGCCTCACAAgtatgttttc ... cttatttcagATTCACCTGGTCCGACGAACTCAGATAGAAACTCAGCAACAAAATTGGTGC
EST: gi|308099141|gb|HO760982.1|HO760982
EST:     ATTGCCTGGTAGATGTGGCCAACATGTCAATCCATTGTCCTGCCTCACAA                         ATTCACCTGGTCCGACGAACTCAGATAGAAACTCAGCAACAAAATTGGTGC
genomic: ATTGCCTGGTAGATGTGGCCAACATGTCAATCCATTGTCCTGCCTCACAAgtatgttttc ... cttatttcagATTCACCTGGTCCGACGAACTCAGATAGAAACTCAGCAACAAAATTGGTGC
EST: gi|21602042|gb|BQ612373.1|BQ612373
EST:     ATTGCCTGGTAGATGTGGCCAACATGTCAATCCATTGTCCTGCCTCACAA                         ATTCACCTGGTCCGACGAACTCAGATAGAAACTCAGCAACAAAATTGGTGC
genomic: ATTGCCTGGTAGATGTGGCCAACATGTCAATCCATTGTCCTGCCTCACAAgtatgttttc ... cttatttcagATTCACCTGGTCCGACGAACTCAGATAGAAACTCAGCAACAAAATTGGTGC