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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTTTTATTTGTTTGTTGTTTTAACAAAACCCATAATCAGATCCGATCCTCTTGAGATTGGGATCAACGCCGAGTCCATGAGCACGCCAGCGCTTTCAGGGgtaacactttactgcttcttcattccgattctaattctataaacttgtccaaatttcgaagcttcctcatttcaattttctttattttgattaatttatggtttcag

Basic information

species Glycine max
transcript GLYMA16G26110.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|7588267|gb|AW704066.1|AW704066
EST:     TTGAGATTGGGATCAACGCCGAGTCTATGAGCACGCCAGCGCTTTCAGGG                         GGCACGGGCCTCTTCTCTGGGTTCACTCGGTTATGCAAGGGCCTCGCGGTG
genomic: TTGAGATTGGGATCAACGCCGAGTCCATGAGCACGCCAGCGCTTTCAGGGgtaacacttt ... atggtttcagGGCACGGGCCTCTTCTCTGGGTTCACTCGGTTATGCAAGGGCCTTGCGGTG
EST: gi|17022945|gb|BM093979.1|BM093979
EST:     TTGAGATTGGGATCAACGCCGAGTCCATGAGCACGCCAGCGCTTTCAGGG                         GGCACGGGCCTCTTCTCTGGGTTCACTCGGTTATGCAAGGGCCTTGCGGTG
genomic: TTGAGATTGGGATCAACGCCGAGTCCATGAGCACGCCAGCGCTTTCAGGGgtaacacttt ... atggtttcagGGCACGGGCCTCTTCTCTGGGTTCACTCGGTTATGCAAGGGCCTTGCGGTG
EST: gi|208034888|gb|GD835960.1|GD835960
EST:     TTGAGATTGGGATCAACGCCGAGTCCATGAGCACGCCAGCGCTTTCAGGG                         GGCATGGGCCTCTTCTCTGGGTTCACTCGGTTATGCAAGGGCCTTGCGGTG
genomic: TTGAGATTGGGATCAACGCCGAGTCCATGAGCACGCCAGCGCTTTCAGGGgtaacacttt ... atggtttcagGGCACGGGCCTCTTCTCTGGGTTCACTCGGTTATGCAAGGGCCTTGCGGTG
EST: gi|15203857|gb|BI426625.1|BI426625
EST:     TTGAGATTGGGATCAACGCCGAGTCTATGAGCACGCCAGCGCTTTCAGGG                         GGCACGGGCCTCTTCTCTGGGTTCACTCGGTTATGCAAGGGCCTCGCGGTG
genomic: TTGAGATTGGGATCAACGCCGAGTCCATGAGCACGCCAGCGCTTTCAGGGgtaacacttt ... atggtttcagGGCACGGGCCTCTTCTCTGGGTTCACTCGGTTATGCAAGGGCCTTGCGGTG